RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TGM2P21980 687 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 HOXC8P31273 242 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 RGS7P49802 495 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 TLE2Q04725 743 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 C15orf59Q2T9L4 293 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-202ENST00000380075 LACTB2Q53H82 288 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-202ENST00000380075 XKR4Q5GH76 650 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 UNC45BQ8IWX7 931 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 SRRM1Q8IYB3 904 aaKnown RBP22.45■■□□□ 1.18
TRIM54-202ENST00000380075 CRYBG2Q8N1P7 616 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 KDM4CQ9H3R0 1056 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 CDHR5Q9HBB8 845 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 TBK1Q9UHD2 729 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 A8MXQ7 604 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 PTPN9P43378 593 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 BCAT1P54687 386 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 CBLBQ13191 982 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 FASTKD3Q14CZ7 662 aaKnown RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 TMED2Q15363 201 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 SOWAHAQ2M3V2 549 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 TTC31Q49AM3 519 aaPredicted RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 ANKRD33Q7Z3H0 272 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 TRABD2AQ86V40 505 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 FAM126BQ8IXS8 530 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 PYROXD1Q8WU10 500 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 C18orf25Q96B23 403 aaPredicted RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 PIWIL1Q96J94 861 aaKnown RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
TRIM54-202ENST00000380075 NXF3Q9H4D5 531 aaKnown RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 ZMYND8Q9ULU4 1186 aaPredicted RBP22.44■■□□□ 1.18
TRIM54-202ENST00000380075 TREHO43280 583 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 CREB1P16220 341 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 GCAP28676 217 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 ACTN3Q08043 901 aaPredicted RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 BST2Q10589 180 aaKnown RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 SH3PXD2AQ5TCZ1 1133 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 DARS2Q6PI48 645 aaKnown RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PDIK1LQ8N165 341 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 NME8Q8N427 588 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 FAM71DQ8N9W8 422 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 ANKRD52Q8NB46 1076 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 FAM172AQ8WUF8 416 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 ZNF670Q9BS34 389 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 FAM49BQ9NUQ9 324 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 FAM47DPA6NHR8 397 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PRPF4O43172 522 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 ACADSBP45954 432 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 RPL34P49207 117 aaKnown RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PDE4CQ08493 712 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 EFHC2Q5JST6 749 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 ANKRD42Q8N9B4 389 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 DNAJB3Q8WWF6 145 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 FRMD8Q9BZ67 464 aaPredicted RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 CXCL16Q9H2A7 254 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PSMC3IPQ9P2W1 217 aaPredicted RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 SMG5Q9UPR3 1016 aaKnown RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PIN4Q9Y237 131 aaKnown RBP22.43■■□□□ 1.18
TRIM54-202ENST00000380075 HES2Q9Y543 173 aa22.43■■□□□ 1.18
TRIM54-202ENST00000380075 PIK3R2O00459 728 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 PAPSS1O43252 624 aaPredicted RBP22.42■■□□□ 1.18
TRIM54-202ENST00000380075 STX2P32856 288 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 RNASELQ05823 741 aaKnown RBP22.42■■□□□ 1.18
TRIM54-202ENST00000380075 MMRN1Q13201 1228 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 CDO1Q16878 200 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 KLHL38Q2WGJ6 581 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 SLC26A9Q7LBE3 791 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 MGARPQ8TDB4 240 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 CCT6BQ92526 530 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 KHSRPQ92945 711 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRIM54-202ENST00000380075 RTP4Q96DX8 246 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 MAGEB18Q96M61 343 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 OSBPL7Q9BZF2 842 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 NGRNQ9NPE2 291 aaKnown RBP22.42■■□□□ 1.18
TRIM54-202ENST00000380075 NME7Q9Y5B8 376 aa22.42■■□□□ 1.18
TRIM54-202ENST00000380075 SMIM28A0A1B0GU29 152 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 KPNA7A9QM74 516 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 APOL1O14791 398 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 GRAP2O75791 330 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 GNAT1P11488 350 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 ATP2A2P16615 1042 aaKnown RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 CRYBB1P53674 252 aaPredicted RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 GEMIN4P57678 1058 aaKnown RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 FAAP100Q0VG06 881 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 LRRC14Q15048 493 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 SV2CQ496J9 727 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 GLRA4Q5JXX5 417 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 ANKRD22Q5VYY1 191 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 SLC9A4Q6AI14 798 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 LIMS2Q7Z4I7 341 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 HSFY1Q96LI6 401 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 TOX2Q96NM4 488 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 PCDH18Q9HCL0 1135 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 PAK5Q9P286 719 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 SNX3O60493 162 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 TAF6P49848 677 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 ATP11AP98196 1134 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 IL9RQ01113 521 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 C4orf22Q6V702 233 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 PLD5Q8N7P1 536 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 FAF2Q96CS3 445 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms