RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SNRPAP09012 282 aaKnown RBP18.9■□□□□ 0.62
TDP2-202ENST00000378198 INSRRP14616 1297 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 ARF4P18085 180 aaPredicted RBP18.9■□□□□ 0.62
TDP2-202ENST00000378198 BGNP21810 368 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 RBL1P28749 1068 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 SERPINB4P48594 390 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 SYCP2LQ5T4T6 812 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 TRIM42Q8IWZ5 723 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 PQLC3Q8N755 202 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 PPM1NQ8N819 430 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 SKA1Q96BD8 255 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 NSL1Q96IY1 281 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 PIWIL1Q96J94 861 aaKnown RBP18.9■□□□□ 0.62
TDP2-202ENST00000378198 NUDCD1Q96RS6 583 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 TMEM120AQ9BXJ8 343 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 PCDH18Q9HCL0 1135 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 HEY1Q9Y5J3 304 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 NUMBLQ9Y6R0 609 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 KAT6AQ92794 2004 aa18.9■□□□□ 0.62
TDP2-202ENST00000378198 TRIM49D1C9J1S8 452 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 CSDE1O75534 798 aaKnown RBP18.89■□□□□ 0.62
TDP2-202ENST00000378198 PRKCHP24723 683 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 GOLGA7BQ2TAP0 167 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 CTAGE3PQ8IX95 158 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 GPC2Q8N158 579 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 MCUQ8NE86 351 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 ACAP3Q96P50 834 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 BTBD10Q9BSF8 475 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 POPDC2Q9HBU9 364 aa18.89■□□□□ 0.62
TDP2-202ENST00000378198 DICER1Q9UPY3 1922 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 ZNF487B1APH4 448 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 MDM4O15151 490 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 DLDP09622 509 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 TPBGLP0DKB5 382 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 SETSIPP0DME0 302 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 SDC4P31431 198 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 SLC6A3Q01959 620 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 CAND1Q86VP6 1230 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 LINC01465Q8N7H1 131 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 PCDH19Q8TAB3 1148 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 FAM172AQ8WUF8 416 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 PTCD3Q96EY7 689 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 SRPK1Q96SB4 655 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 ZNF670Q9BS34 389 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
TDP2-202ENST00000378198 AKT3Q9Y243 479 aa18.89■□□□□ 0.61
TDP2-202ENST00000378198 RGS7P49802 495 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 SNX16P57768 344 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 ZBTB16Q05516 673 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 KRT72Q14CN4 511 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 Q3C1V9 767 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 OLFML1Q6UWY5 402 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 SNRNP25Q9BV90 132 aaKnown RBP18.88■□□□□ 0.61
TDP2-202ENST00000378198 SLC4A5Q9BY07 1137 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 DENND2DQ9H6A0 471 aaPredicted RBP18.88■□□□□ 0.61
TDP2-202ENST00000378198 TXNRD2Q9NNW7 524 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 PDGFCQ9NRA1 345 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 ARL8BQ9NVJ2 186 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 GPATCH2LQ9NWQ4 482 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 RBPJLQ9UBG7 517 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 RALGAPA2Q2PPJ7 1873 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 CXCL11O14625 94 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 TOMM70O94826 608 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 GM2AP17900 193 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 SERPINB3P29508 390 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 TAF11Q15544 211 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 PKDCCQ504Y2 493 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 BZW1Q7L1Q6 419 aaKnown RBP18.88■□□□□ 0.61
TDP2-202ENST00000378198 CDKL3Q8IVW4 592 aaPredicted RBP18.88■□□□□ 0.61
TDP2-202ENST00000378198 KCNV2Q8TDN2 545 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 OTUD5Q96G74 571 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 MIPEPQ99797 713 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 ELP3Q9H9T3 547 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 MKS1Q9NXB0 559 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 LRRC42Q9Y546 428 aa18.88■□□□□ 0.61
TDP2-202ENST00000378198 APOEP02649 317 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 APRTP07741 180 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 CCNFP41002 786 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 IREB2P48200 963 aaKnown RBP18.87■□□□□ 0.61
TDP2-202ENST00000378198 GCLCP48506 637 aaPredicted RBP18.87■□□□□ 0.61
TDP2-202ENST00000378198 PPP1R26Q5T8A7 1209 aaPredicted RBP18.87■□□□□ 0.61
TDP2-202ENST00000378198 FAM91A1Q658Y4 838 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 PMF1Q6P1K2 205 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 TMEM110Q86TL2 294 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 MTBPQ96DY7 904 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 PPP1R16BQ96T49 567 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 CADM1Q9BY67 442 aaKnown RBP18.87■□□□□ 0.61
TDP2-202ENST00000378198 DCLRE1BQ9H816 532 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
TDP2-202ENST00000378198 PLLPQ9Y342 182 aa18.87■□□□□ 0.61
TDP2-202ENST00000378198 SLC15A5A6NIM6 579 aa18.86■□□□□ 0.61
TDP2-202ENST00000378198 ASB14A6NK59 587 aa18.86■□□□□ 0.61
TDP2-202ENST00000378198 CXorf49A8MYA2 514 aaPredicted RBP18.86■□□□□ 0.61
TDP2-202ENST00000378198 KIF1CO43896 1103 aaKnown RBP18.86■□□□□ 0.61
TDP2-202ENST00000378198 KRT38O76015 456 aa18.86■□□□□ 0.61
TDP2-202ENST00000378198 LUC7L3O95232 432 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms