RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 C8orf48Q96LL4 319 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 USP29Q9HBJ7 922 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 OGDHLQ9ULD0 1010 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 PCDHGB6Q9Y5F9 930 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 VSTM5A8MXK1 200 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 TPP1O14773 563 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 FYB1O15117 783 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 FGBP02675 491 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 ATF3P18847 181 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 ACVR2AP27037 513 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 CPT1AP50416 773 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 GHRHRQ02643 423 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 MAPK7Q13164 816 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 GALEQ14376 348 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 KIAA0753Q2KHM9 967 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 CC2D1BQ5T0F9 858 aaKnown RBP2.67□□□□□ -1.98
VPS13A-206ENST00000376646 ZNF548Q8NEK5 533 aaPredicted RBP2.67□□□□□ -1.98
VPS13A-206ENST00000376646 TTC8Q8TAM2 541 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 LRTOMTQ8WZ04 291 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 COQ8BQ96D53 544 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 SUCLG2Q96I99 432 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 CCDC136Q96JN2 1154 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 FOXP1Q9H334 677 aaPredicted RBP2.67□□□□□ -1.98
VPS13A-206ENST00000376646 SNX15Q9NRS6 342 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 TBC1D23Q9NUY8 699 aa2.67□□□□□ -1.98
VPS13A-206ENST00000376646 BTBD19C9JJ37 291 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 SOCS2O14508 198 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 TXNP10599 105 aaKnown RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 TPH1P17752 444 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 PEX2P28328 305 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 TBX4P57082 545 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 KPNB1Q14974 876 aaKnown RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 C10orf25Q5T742 122 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 RRAGBQ5VZM2 374 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 GRHL2Q6ISB3 625 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 TCEAL8Q8IYN2 117 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 EDC3Q96F86 508 aaKnown RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 SIGLEC11Q96RL6 698 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 ZNF287Q9HBT7 754 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 C1orf112Q9NSG2 853 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 DKK4Q9UBT3 224 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 SLC27A6Q9Y2P4 619 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 LY6G6EA0A0G2JKS1 128 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 ISM1B1AKI9 464 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 IKBKBO14920 756 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 CCP110O43303 1012 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 TMPRSS11DO60235 418 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 RNF8O76064 485 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 MYF5P13349 255 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 BTF3P20290 206 aaKnown RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 PLCD1P51178 756 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 POLGP54098 1239 aaPredicted RBP2.66□□□□□ -1.98
VPS13A-206ENST00000376646 GPC5P78333 572 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 FHL3Q13643 280 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 MANEALQ5VSG8 457 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 PLAG1Q6DJT9 500 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 NXNQ6DKJ4 435 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 RAB11FIP4Q86YS3 637 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 LIX1LQ8IVB5 337 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 C16orf52Q8NHV5 167 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 CUL5Q93034 780 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 APIPQ96GX9 242 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 KAZALD1Q96I82 304 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 HIST1H2AAQ96QV6 131 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 FAM204AQ9H8W3 233 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 MLXIPLQ9NP71 852 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 HEY2Q9UBP5 337 aa2.66□□□□□ -1.98
VPS13A-206ENST00000376646 GOLGA6CA6NDK9 693 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GOLGA6BA6NDN3 693 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 C16orf96A6NNT2 1141 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 KCNAB3O43448 404 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 PRC1O43663 620 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GOLGA6DP0CG33 693 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 HTR7P34969 479 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 CARSP49589 748 aaKnown RBP2.65□□□□□ -1.99
VPS13A-206ENST00000376646 CFHR3Q02985 330 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 CFHR1Q03591 330 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 PPP4R4Q6NUP7 873 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 PIP4P1Q86T03 277 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 KRT73Q86Y46 540 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.65□□□□□ -1.992e-6■■■■□ 23.7
VPS13A-206ENST00000376646 SCNM1Q9BWG6 230 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 SAP30LQ9HAJ7 183 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 SLC52A1Q9NWF4 448 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GEMIN8Q9NWZ8 242 aaKnown RBP2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GOLGA6AQ9NYA3 693 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 VPS51Q9UID3 782 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 VPS4AQ9UN37 437 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 HPSEQ9Y251 543 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 SIRT4Q9Y6E7 314 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-206ENST00000376646 H3BNC9 293 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 RRHO14718 337 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 KIF3BO15066 747 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 FRS3O43559 492 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 MBPP02686 304 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GALNSP34059 522 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 THBS4P35443 961 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 GNALP38405 381 aa2.65□□□□□ -1.99
VPS13A-206ENST00000376646 FOXG1P55316 489 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms