RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 HERC6Q8IVU3 1022 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 UBASH3BQ8TF42 649 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 RAD51CO43502 376 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 TYW3Q6IPR3 259 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CASP12Q6UXS9 341 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 RWDD3Q9Y3V2 267 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 RRN3P2A6NIE6 340 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 TMEM114B3SHH9 223 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 E7ENQ6 273 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 LTKP29376 864 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ITIH4Q14624 930 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 S100A13Q99584 98 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 NDUFA13Q9P0J0 144 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 KIAA0408Q6ZU52 694 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CACTIN-AS1Q8N1I8 211 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 EGFRP00533 1210 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 SRGNP10124 158 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 CKBP12277 381 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 MTF1Q14872 753 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.35
VPS13A-204ENST00000376634 MAML3Q96JK9 1138 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.35
VPS13A-204ENST00000376634 UBA2Q9UBT2 640 aaPredicted RBP12.83□□□□□ -0.35
VPS13A-204ENST00000376634 A0A087X0T9 212 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 GTF2H1P32780 548 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 OTUD4Q01804 1114 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 CCDC130P13994 396 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 RNF180Q86T96 592 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 TRPC4APQ8TEL6 797 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 EPHB2P29323 1055 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 AMHR2Q16671 573 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 METTL16Q86W50 562 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 SYTL1Q8IYJ3 562 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 THRAP10827 490 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 DSG3P32926 999 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 GPRASP2Q96D09 838 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 KLHL28Q9NXS3 571 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 VAV3Q9UKW4 847 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 PDE9AO76083 593 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 SLITRK2Q9H156 845 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 AHSPQ9NZD4 102 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF24P17028 368 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 EXOSC10Q01780 885 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 CYP24A1Q07973 514 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 TAF13Q15543 124 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 BDH2Q9BUT1 245 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 SH3BP4Q9P0V3 963 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 FLT1P17948 1338 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 GARTP22102 1010 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 CARNMT1Q8N4J0 409 aa12.83□□□□□ -0.36
VPS13A-204ENST00000376634 UTP15Q8TED0 518 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 PRRC2BQ5JSZ5 2229 aaKnown RBP12.83□□□□□ -0.36
VPS13A-204ENST00000376634 CLPTM1O96005 669 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 MYBP10242 640 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 CYP2C9P11712 490 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 LBPP18428 481 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 FAM98BQ52LJ0 330 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 SHC4Q6S5L8 630 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 VPS33AQ96AX1 596 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 AP1G2O75843 785 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 BAIAP3O94812 1187 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 CNTFP26441 200 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 ALDH9A1P49189 494 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 ITGA1P56199 1179 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 CRYMQ14894 314 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 KCNT1Q5JUK3 1230 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 EID3Q8N140 333 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 MAGEB10Q96LZ2 347 aaPredicted RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 APOL4Q9BPW4 351 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 CALB2P22676 271 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 THPOP40225 353 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 DDI2Q5TDH0 399 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PI4K2AQ9BTU6 479 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms