RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 C10orf76Q5T2E6 689 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
CLCN6-205ENST00000376492 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
CLCN6-205ENST00000376492 PROSER1Q86XN7 944 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 SLC41A1Q8IVJ1 513 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
CLCN6-205ENST00000376492 WBP2Q969T9 261 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 CCDC34Q96HJ3 373 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 CD93Q9NPY3 652 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
CLCN6-205ENST00000376492 CGNQ9P2M7 1197 aaKnown RBP13.93□□□□□ -0.18
CLCN6-205ENST00000376492 PCDH15Q96QU1 1955 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 SMG1Q96Q15 3661 aaKnown RBP13.92□□□□□ -0.18
CLCN6-205ENST00000376492 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 A0A1W2PQF6 199 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 FAM221BA6H8Z2 402 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 H0Y626 953 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 TULP3O75386 442 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 TRIM16O95361 564 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 HOXB2P14652 356 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 GAD2Q05329 585 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 ZNF33AQ06730 810 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 KNOP1Q1ED39 458 aaKnown RBP13.92□□□□□ -0.18
CLCN6-205ENST00000376492 EGFLAMQ63HQ2 1017 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 C19orf48Q6RUI8 117 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLCN6-205ENST00000376492 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 TERB1Q8NA31 727 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 OR6B3Q8NGW1 331 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 CEP76Q8TAP6 659 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 FBXO32Q969P5 355 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 HSPA12BQ96MM6 686 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 ACOX2Q99424 681 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 B3GNT5Q9BYG0 378 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 SNX25Q9H3E2 840 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 KIAA1586Q9HCI6 787 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 AGPAT3Q9NRZ7 376 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 CYP8B1Q9UNU6 501 aa13.92□□□□□ -0.18
CLCN6-205ENST00000376492 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 ARHGAP33O14559 1287 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 SH3BP5O60239 455 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 IRF1P10914 325 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 PTPN1P18031 435 aaKnown RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 NDUFV2P19404 249 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 YWHAQP27348 245 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 SCAPQ12770 1279 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 DUOXA2Q1HG44 320 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 ZNF423Q2M1K9 1284 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 ANO4Q32M45 955 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 BTBD8Q5XKL5 378 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 SLC36A4Q6YBV0 504 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 TMEM25Q86YD3 366 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 C12orf56Q8IXR9 622 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 ELOA2Q8IYF1 753 aaPredicted RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 PNPLA1Q8N8W4 532 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 TRIML1Q8N9V2 468 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 SCAMP5Q8TAC9 235 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 TMEM174Q8WUU8 243 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 CCDC47Q96A33 483 aaKnown RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 TIGD1Q96MW7 591 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 ELOVL4Q9GZR5 314 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 SLC6A17Q9H1V8 727 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 CCSER2Q9H7U1 834 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 CD248Q9HCU0 757 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
CLCN6-205ENST00000376492 HSPBP1Q9NZL4 362 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 DEC1Q9P2X7 70 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 GPSM3Q9Y4H4 160 aa13.91□□□□□ -0.18
CLCN6-205ENST00000376492 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 PCNX2A6NKB5 2137 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 TACC1O75410 805 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-205ENST00000376492 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
CLCN6-205ENST00000376492 TRMT11Q7Z4G4 463 aaKnown RBP13.9□□□□□ -0.18
CLCN6-205ENST00000376492 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 B3GALNT2Q8NCR0 500 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 SPHK2Q9NRA0 654 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-205ENST00000376492 SH3BP1Q9Y3L3 701 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 RAD54BQ9Y620 910 aa13.9□□□□□ -0.18
CLCN6-205ENST00000376492 CLIC2O15247 247 aa13.89□□□□□ -0.19
CLCN6-205ENST00000376492 GJB3O75712 270 aa13.89□□□□□ -0.19
CLCN6-205ENST00000376492 FTH1P19P0C7X4 201 aa13.89□□□□□ -0.19
CLCN6-205ENST00000376492 NTSR1P30989 418 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms