RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PTBP2Q9UKA9 531 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-202ENST00000376020 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
SHROOM4-202ENST00000376020 AKT3Q9Y243 479 aa9.09□□□□□ -0.95
SHROOM4-202ENST00000376020 ABCC6O95255 1503 aa9.09□□□□□ -0.95
SHROOM4-202ENST00000376020 BAIAP3O94812 1187 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 ZCCHC18P0CG32 403 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 PDGFRAP16234 1089 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 PIK3R1P27986 724 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 PLOD1Q02809 727 aaPredicted RBP9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 TTMPQ5BVD1 217 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 PACS1Q6VY07 963 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 PLEKHM3Q6ZWE6 761 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 CHSY1Q86X52 802 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 OR2W6PQ8NHA6 318 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 SLCO2A1Q92959 643 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 ORAI2Q96SN7 254 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 EHD1Q9H4M9 534 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 ZNF302Q9NR11 478 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 UBP1Q9NZI7 540 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 ITGA11Q9UKX5 1188 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 POLIQ9UNA4 740 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 BTBD3Q9Y2F9 522 aa9.09□□□□□ -0.96
SHROOM4-202ENST00000376020 UQCRBP14927 111 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 GP5P40197 560 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 ZNF513Q8N8E2 541 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 C17orf50Q8WW18 174 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 TRHDEQ9UKU6 1024 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 STAT5AP42229 794 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 STAT5BP51692 787 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PTP4A2Q12974 167 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 KIF22Q14807 665 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 DHFR2Q86XF0 187 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 EID3Q8N140 333 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 EZH1Q92800 747 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 FAM213AQ9BRX8 229 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 TMEM117Q9H0C3 514 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 DHX35Q9H5Z1 703 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 STK39Q9UEW8 545 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PLK4O00444 970 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 DDX3XO00571 662 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 KCNA2P16389 499 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PAX3P23760 479 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 TCP10Q12799 353 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 CTTNQ14247 550 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PDCD4Q53EL6 469 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 NDNQ99608 321 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 NEUROG2Q9H2A3 272 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 EBF2Q9HAK2 575 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 SCN11AQ9UI33 1791 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 UBDO15205 165 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 TPBGLP0DKB5 382 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 GPD1P21695 349 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 EIF4BP23588 611 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 POU5F1BQ06416 359 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 SPANXN3Q5MJ09 141 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 POTEHQ6S545 545 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 UBAP1Q9NZ09 502 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PHGDHO43175 533 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 CASP1P29466 404 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 KRT74Q7RTS7 529 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 C7orf26Q96N11 449 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 THAP2Q9H0W7 228 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 FCHO2Q0JRZ9 810 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PIK3C3Q8NEB9 887 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 SPIRE2Q8WWL2 714 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 ZBTB1Q9Y2K1 713 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 SNX13Q9Y5W8 968 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 TK2O00142 265 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 DNAJB5O75953 348 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 LTKP29376 864 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 CRKP46108 304 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 LPIN1Q14693 890 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 NFIL3Q16649 462 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 DUPD1Q68J44 220 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 ETNPPLQ8TBG4 499 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 NMD3Q96D46 503 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 PSMD13Q9UNM6 376 aa9.08□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 GJB6O95452 261 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 TDP2O95551 362 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 ZNF23P17027 643 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
SHROOM4-202ENST00000376020 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms