RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 GRAPQ13588 217 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 PTGES3Q15185 160 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 TAF8Q7Z7C8 310 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 C11orf96Q7Z7L8 435 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 GRAPLQ8TC17 118 aaPredicted RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 FUT8Q9BYC5 575 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 REXO4Q9GZR2 422 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 THAP1Q9NVV9 213 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 RPLP2P05387 115 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 DALRD3Q5D0E6 543 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 RNF146Q9NTX7 359 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 TRIM49D1C9J1S8 452 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 ETFBP38117 255 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 HAUS6Q7Z4H7 955 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 MYO1HQ8N1T3 1032 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 USP38Q8NB14 1042 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 SKA1Q96BD8 255 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 SLC24A2Q9UI40 661 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 UGGT1Q9NYU2 1555 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 ATG7O95352 703 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 RAD51CO43502 376 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 DYNLL1P63167 89 aaKnown RBP8.62□□□□□ -1.03
HSPG2-203ENST00000374695 XIAPP98170 497 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 PWP1Q13610 501 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 TMEM132CQ8N3T6 1108 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 ASB2Q96Q27 587 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 GORASP1Q9BQQ3 440 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 GSTK1Q9Y2Q3 226 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 NEO1Q92859 1461 aa8.62□□□□□ -1.03
HSPG2-203ENST00000374695 PTPN4P29074 926 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ACADVLP49748 655 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CACNA2D1P54289 1103 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 PRKCBP05771 671 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 HOXB6P17509 224 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 RAB25P57735 213 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 IL5RAQ01344 420 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TOB2Q14106 344 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 IER5Q5VY09 327 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CCDC185Q8N715 623 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 SH3RF3Q8TEJ3 882 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 METP08581 1390 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MGRN1O60291 552 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 PSMB9P28065 219 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TTC27Q6P3X3 843 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 Q96MT0 163 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MIEF1Q9NQG6 463 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 C8orf4Q9NR00 106 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 FBXO28Q9NVF7 368 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MAGEB16A2A368 324 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CSPG5O95196 566 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 GTF2H1P32780 548 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 COILP38432 576 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ZNF57Q68EA5 555 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ESRP1Q6NXG1 681 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ZNF512Q96ME7 567 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 PRKAB2O43741 272 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ZCCHC18P0CG32 403 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CCDC166P0CW27 439 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 VAC14Q08AM6 782 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TYW3Q6IPR3 259 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 NOTUMQ6P988 496 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 DCP1BQ8IZD4 617 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CENPIQ92674 756 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TRIM9Q9C026 710 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CORO2BQ9UQ03 480 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TRAF2Q12933 501 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MAPK7Q13164 816 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 CDH18Q13634 790 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ATP6V0D2Q8N8Y2 350 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 PJA1Q8NG27 643 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ZNF184Q99676 751 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 GAS2O43903 313 aaKnown RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TPBGLP0DKB5 382 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ODC1P11926 461 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 UCHL3P15374 230 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MZF1P28698 734 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-203ENST00000374695 RIPK1Q13546 671 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 MYCBPAPQ8TBZ2 947 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 ERVK-10P10266 1014 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TRAF3Q13114 568 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 DNAJC3Q13217 504 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 PGS1Q32NB8 556 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TMPRSS6Q8IU80 811 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 C17orf75Q9HAS0 396 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 EMC3Q9P0I2 261 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 NEDD4P46934 1319 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 H3BNX3 289 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 GPR1P46091 355 aa8.61□□□□□ -1.03
HSPG2-203ENST00000374695 NAB1Q13506 487 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms