RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 RASA4O43374 803 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 RECQL4O94761 1208 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 SDC4P31431 198 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
HMGCL-202ENST00000374487 ARL4CP56559 192 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 GPNMBQ14956 572 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 SHHQ15465 462 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 DARS2Q6PI48 645 aaKnown RBP12.61□□□□□ -0.39
HMGCL-202ENST00000374487 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 TTC30AQ86WT1 665 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 CCDC197Q8NCU1 140 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
HMGCL-202ENST00000374487 UBQLN1Q9UMX0 589 aaKnown RBP12.61□□□□□ -0.39
HMGCL-202ENST00000374487 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
HMGCL-202ENST00000374487 C17orf102A2RUQ5 167 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 H0YHG0 523 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 AXLP30530 894 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 STIP1P31948 543 aaKnown RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ROR1Q01973 937 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ADCY1Q08828 1119 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 NR1H3Q13133 447 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 CCDC14Q49A88 953 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 TRNP1Q6NT89 227 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ARHGEF18Q6ZSZ5 1173 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 UNC93AQ86WB7 457 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 PYROXD1Q8WU10 500 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SLC35F5Q8WV83 523 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 MLXIPLQ9NP71 852 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 MBLAC1A4D2B0 266 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SOX1O00570 391 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 CTSHP09668 335 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 STX2P32856 288 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 PHBP35232 272 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ADAM17P78536 824 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 BASP1P80723 227 aaKnown RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 PDK2Q15119 407 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SOWAHAQ2M3V2 549 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 TRIM71Q2Q1W2 868 aaKnown RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 RAB6CQ53S08 254 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 FBXO47Q5MNV8 452 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 FAM172AQ8WUF8 416 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 CPT1BQ92523 772 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ELAC2Q9BQ52 826 aaKnown RBP12.6□□□□□ -0.39
HMGCL-202ENST00000374487 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 RAB6CQ9H0N0 254 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 ACTL7BQ9Y614 415 aa12.6□□□□□ -0.39
HMGCL-202ENST00000374487 H7C0C1 242 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 KRT15P19012 456 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 HOXC8P31273 242 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 GNL1P36915 607 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 ATP5OP48047 213 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 FPGSQ05932 587 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 HABP4Q5JVS0 413 aaKnown RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 NPNTQ6UXI9 565 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 ZDHHC17Q8IUH5 632 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 PDIK1LQ8N165 341 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 NAT8LQ8N9F0 302 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 MRRFQ96E11 262 aaKnown RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 XPO7Q9UIA9 1087 aaKnown RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 CAPN7Q9Y6W3 813 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 KAT6AQ92794 2004 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 SMIM28A0A1B0GU29 152 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 TCP11X1B4DZS4 312 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 SMAPO00193 183 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 BANF1O75531 89 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 ENDOD1O94919 500 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 CKBP12277 381 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 THPOP40225 353 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms