RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 VSTM1Q6UX27 236 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 CCDC185Q8N715 623 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 MAGOHBQ96A72 148 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ZNF558Q96NG5 402 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SNRNP25Q9BV90 132 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 PRPSAP2O60256 369 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 SOAT2O75908 522 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 GJB5O95377 273 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 SOD2P04179 222 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 RPL17P18621 184 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 CHRNA3P32297 505 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 KCNJ1P48048 391 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 USP46P62068 366 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 BRD3Q15059 726 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 BOLA3Q53S33 107 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 SCYL2Q6P3W7 929 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 CCNI2Q6ZMN8 369 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 SCD5Q86SK9 330 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 C7orf61Q8IZ16 206 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 TEKT4Q8WW24 435 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 CASKIN2Q8WXE0 1202 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 RIN2Q8WYP3 895 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 MTMR10Q9NXD2 777 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 IL37Q9NZH6 218 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 BACE2Q9Y5Z0 518 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
NIPAL3-204ENST00000374399 WDR27A2RRH5 827 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 I6L893 689 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 MDM4O15151 490 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 ROR1Q01973 937 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 PSMD5Q16401 504 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 ZFYVE27Q5T4F4 411 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 KAZNQ674X7 775 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 CCDC137Q6PK04 289 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 GSPT2Q8IYD1 628 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 KCTD6Q8NC69 237 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 SEC14L1Q92503 715 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 EDEM1Q92611 657 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 RUBCNQ92622 972 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 NMUR1Q9HB89 426 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 PCDH18Q9HCL0 1135 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 WDR6Q9NNW5 1121 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 ANLNQ9NQW6 1124 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 PIGVQ9NUD9 493 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 SLC27A5Q9Y2P5 690 aa16.37■□□□□ 0.21
NIPAL3-204ENST00000374399 M0QYT0 321 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SEC31AO94979 1220 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 TUBBP07437 444 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 HAPLN1P10915 354 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CPB1P15086 417 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 LAG3P18627 525 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 FNTAP49354 379 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 DSG1Q02413 1049 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 GUCY2DQ02846 1103 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 EIF4EBP2Q13542 120 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 BEND6Q5SZJ8 279 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SPOUT1Q5T280 376 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 ADAM32Q8TC27 787 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 HNRNPLLQ8WVV9 542 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 NCAPGQ9BPX3 1015 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 TRIM51Q9BSJ1 452 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 HERC2P3Q9BVR0 1158 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 OXCT2Q9BYC2 517 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 EPB41L5Q9HCM4 733 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 FAM92AA1XBS5 289 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 ZBBXA8MT70 800 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 TRIM66O15016 1216 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 NCAM1P13591 858 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SYN1P17600 705 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 ECHS1P30084 290 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 L1CAMP32004 1257 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CARSP49589 748 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CDH6P55285 790 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 DR1Q01658 176 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 DUSP4Q13115 394 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 DPYSL2Q16555 572 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CCNG2Q16589 344 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 ERMARDQ5T6L9 678 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 BBS12Q6ZW61 710 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 BEND5Q7L4P6 421 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms