RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 RHBDF2Q6PJF5 856 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 NPNTQ6UXI9 565 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 STRADAQ7RTN6 431 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 CTU1Q7Z7A3 348 aaKnown RBP17.61■□□□□ 0.41
PTPN20-203ENST00000374342 ABI1Q8IZP0 508 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 ARL8AQ96BM9 186 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 PKMYT1Q99640 499 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 C10orf88Q9H8K7 445 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 OGDHLQ9ULD0 1010 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 AP4E1Q9UPM8 1137 aa17.61■□□□□ 0.41
PTPN20-203ENST00000374342 SYNJ2BP-COX16A0A087WUM0 186 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GOLGA6CA6NDK9 693 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 NRP1O14786 923 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 IFNB1P01574 187 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GOLGA6DP0CG33 693 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GATMP50440 423 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 BCAR1P56945 870 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 EIF3EP60228 445 aaKnown RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 PITX1P78337 314 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 CAV1Q03135 178 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 YWHAHQ04917 246 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 OTUD1Q5VV17 481 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 FAM171BQ6P995 826 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 FAM131BQ86XD5 332 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 BBOF1Q8ND07 529 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 SEPT8Q92599 483 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 RNF157Q96PX1 679 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 DHX35Q9H5Z1 703 aaKnown RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 PCDH9Q9HC56 1237 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GOLGA6AQ9NYA3 693 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 COX16Q9P0S2 106 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 KANSL3Q9P2N6 904 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 STAP1Q9ULZ2 295 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 MICAL3Q7RTP6 2002 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GOLGA6L10A6NI86 522 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 HHLA1C9JL84 531 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 H0YGN5 161 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 USP17L7P0C7H9 530 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 NOS2P35228 1153 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 CHKAP35790 457 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 ZNF844Q08AG5 666 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 GPS1Q13098 491 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 SLMAPQ14BN4 828 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 ANKRD20A8PQ5CZ79 823 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 RAB41Q5JT25 222 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 DENND2CQ68D51 928 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 SLC2A13Q96QE2 648 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 EPB41L4BQ9H329 900 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 PABPC3Q9H361 631 aaKnown RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 POPDC2Q9HBU9 364 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 PCDHB7Q9Y5E2 793 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 NFS1Q9Y697 457 aa17.6■□□□□ 0.41
PTPN20-203ENST00000374342 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-203ENST00000374342 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 E7ENQ6 273 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 ENPP3O14638 875 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 APOL1O14791 398 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 NOMO1Q15155 1222 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 DPYSL2Q16555 572 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 SYPL2Q5VXT5 272 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 LRRTM3Q86VH5 581 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 RSAD2Q8WXG1 361 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 SCLYQ96I15 445 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-203ENST00000374342 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 ELAC1Q9H777 363 aaKnown RBP17.59■□□□□ 0.41
PTPN20-203ENST00000374342 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 AAASQ9NRG9 546 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 TTC3P53804 2025 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 TMEM189-UBE2V1I3L0A0 370 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 M0QYT0 321 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 DNALI1O14645 258 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-203ENST00000374342 CAPN9O14815 690 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 COL6A1P12109 1028 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 IL4RP24394 825 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 GDF10P55107 478 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 ROR1Q01973 937 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 IFFO1Q0D2I5 559 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 TERF2Q15554 542 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 MAPRE1Q15691 268 aaKnown RBP17.59■□□□□ 0.41
PTPN20-203ENST00000374342 UBAP2Q5T6F2 1119 aaKnown RBP17.59■□□□□ 0.41
PTPN20-203ENST00000374342 PQLC3Q8N755 202 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 P3H4Q92791 437 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 APBB2Q92870 758 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 NPY6RQ99463 290 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 SEMA4AQ9H3S1 761 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 ADAM21Q9UKJ8 722 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 NAALADL1Q9UQQ1 740 aa17.59■□□□□ 0.41
PTPN20-203ENST00000374342 ZBED1O96006 694 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 OR4Q2P0C623 313 aa17.58■□□□□ 0.4
PTPN20-203ENST00000374342 MYZAPP0CAP1 466 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms