RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LOC100653049A0A140TA62 436 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 APOC4-APOC2K7ER74 178 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 PIK3R2O00459 728 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 KRT34O76011 436 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 APOC2P02655 101 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 PEX2P28328 305 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 CPOXP36551 454 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 C16orf46Q6P387 395 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 POLNQ7Z5Q5 900 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 TCHPQ9BT92 498 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 VCX3BQ9H321 246 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 VCX3AQ9NNX9 186 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 DDX18Q9NVP1 670 aaKnown RBP14.21□□□□□ -0.13
USP49-201ENST00000373006 STK32BQ9NY57 414 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 SOX13Q9UN79 622 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 ZNF711Q9Y462 761 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.13
USP49-201ENST00000373006 PGM3O95394 542 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 FAM200BP0CF97 657 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 MIPP30301 263 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 ROR1Q01973 937 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 TEX44Q53QW1 395 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 EFHC1Q5JVL4 640 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 TMCO4Q5TGY1 634 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 TRMT10BQ6PF06 316 aaKnown RBP14.21□□□□□ -0.14
USP49-201ENST00000373006 DNAJC14Q6Y2X3 702 aaPredicted RBP14.21□□□□□ -0.14
USP49-201ENST00000373006 ARMCX6Q7L4S7 300 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 DHDDSQ86SQ9 333 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 RSPH3Q86UC2 560 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 SESTD1Q86VW0 696 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 PDSS2Q86YH6 399 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 ARHGAP18Q8N392 663 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 NIPA2Q8N8Q9 360 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 FAM172AQ8WUF8 416 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 MAD1L1Q9Y6D9 718 aa14.21□□□□□ -0.14
USP49-201ENST00000373006 ITM2AO43736 263 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 PLA2G6O60733 806 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 IL1BP01584 269 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 C1QAP02745 245 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 PROCP04070 461 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 APRTP07741 180 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 CSH1P0DML2 217 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 CSH2P0DML3 217 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 SERPINB6P35237 376 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 YWHAZP63104 245 aaKnown RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 STX3Q13277 289 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 BAATQ14032 418 aaPredicted RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 PPP1R2P3Q6NXS1 205 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 DEPTORQ8TB45 409 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 SIRPGQ9P1W8 387 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 NXF1Q9UBU9 619 aaKnown RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 SUPT3HO75486 399 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 LSM8O95777 96 aaKnown RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 SERPINA6P08185 405 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 KCNJ11Q14654 390 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 MYBPC3Q14896 1274 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 TCHHL1Q5QJ38 904 aaPredicted RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 GDPD5Q8WTR4 605 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 HIC2Q96JB3 615 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 PLAC1Q9HBJ0 212 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 ZNF70Q9UC06 446 aaPredicted RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 PPME1Q9Y570 386 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 HEY1Q9Y5J3 304 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 KCNN4O15554 427 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 ASS1P00966 412 aaKnown RBP14.2□□□□□ -0.14
USP49-201ENST00000373006 VCLP18206 1134 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 RAP1GAPP47736 663 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 EMC2Q15006 297 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 TRIP10Q15642 601 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 MMEL1Q495T6 779 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 C1QTNF12Q5T7M4 302 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 DPH6Q7L8W6 267 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 CCDC33Q8N5R6 958 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 CPXM1Q96SM3 734 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 RMI1Q9H9A7 625 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
USP49-201ENST00000373006 SDR42E2A6NKP2 422 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 FKBP6O75344 327 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
USP49-201ENST00000373006 EIF4BP23588 611 aaKnown RBP14.19□□□□□ -0.14
USP49-201ENST00000373006 CDH6P55285 790 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 TAP1Q03518 808 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 ANGEL2Q5VTE6 544 aaKnown RBP14.19□□□□□ -0.14
USP49-201ENST00000373006 ACAD11Q709F0 780 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 TRIM42Q8IWZ5 723 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 TTLL6Q8N841 843 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 XAB2Q9HCS7 855 aaKnown RBP14.19□□□□□ -0.14
USP49-201ENST00000373006 EFR3BQ9Y2G0 817 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 DNAJC16Q9Y2G8 782 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 RIPK3Q9Y572 518 aa14.19□□□□□ -0.14
USP49-201ENST00000373006 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms