RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RTKNQ9BST9 563 aa19.89■□□□□ 0.77
TMEM53-201ENST00000372235 KLF16Q9BXK1 252 aaPredicted RBP19.89■□□□□ 0.77
TMEM53-201ENST00000372235 POLMQ9NP87 494 aaPredicted RBP19.89■□□□□ 0.77
TMEM53-201ENST00000372235 SEMA4GQ9NTN9 838 aa19.89■□□□□ 0.77
TMEM53-201ENST00000372235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.89■□□□□ 0.77
TMEM53-201ENST00000372235 HESX1Q9UBX0 185 aa19.89■□□□□ 0.77
TMEM53-201ENST00000372235 NAGPAQ9UK23 515 aa19.89■□□□□ 0.77
TMEM53-201ENST00000372235 OTOGLQ3ZCN5 2332 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 CYP26A1O43174 497 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 RAD23BP54727 409 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 BYSLQ13895 437 aaKnown RBP19.88■□□□□ 0.77
TMEM53-201ENST00000372235 E2F5Q15329 346 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 GAB4Q2WGN9 574 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 ANO4Q32M45 955 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 CCDC40Q4G0X9 1142 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 CBWD6Q4V339 395 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 C2orf27AQ580R0 203 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 CBWD3Q5JTY5 395 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 CBWD5Q5RIA9 395 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 C10orf120Q5SQS8 335 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 NAIF1Q69YI7 327 aaPredicted RBP19.88■□□□□ 0.77
TMEM53-201ENST00000372235 SLC4A11Q8NBS3 891 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 EZH1Q92800 747 aaPredicted RBP19.88■□□□□ 0.77
TMEM53-201ENST00000372235 SLC35C1Q96A29 364 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 JAKMIP2Q96AA8 810 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 HHIPQ96QV1 700 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 DCLK3Q9C098 648 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 MYH10P35580 1976 aa19.88■□□□□ 0.77
TMEM53-201ENST00000372235 A0A1W2PQH9 124 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 TBC1D3BA6NDS4 549 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 TGM1P22735 817 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 CHKAP35790 457 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 BCAT1P54687 386 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 SEC13P55735 322 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 SRSF5Q13243 272 aaKnown RBP19.87■□□□□ 0.77
TMEM53-201ENST00000372235 CRY1Q16526 586 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 SGO2Q562F6 1265 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 GPRIN1Q7Z2K8 1008 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 BBS7Q8IWZ6 715 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 CNOT6LQ96LI5 555 aaKnown RBP19.87■□□□□ 0.77
TMEM53-201ENST00000372235 MARK1Q9P0L2 795 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 MAN1B1Q9UKM7 699 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 STRIP2Q9ULQ0 834 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 GVINP1Q7Z2Y8 2422 aa19.87■□□□□ 0.77
TMEM53-201ENST00000372235 ZBTB24O43167 697 aaPredicted RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 EPN2O95208 641 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 IRF1P10914 325 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 VDRP11473 427 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 SLC6A11P48066 632 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 PXNP49023 591 aaPredicted RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 FMO5P49326 533 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 PMS1P54277 932 aaKnown RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 STILQ15468 1287 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 RAB41Q5JT25 222 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 PRR23CQ6ZRP0 262 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 RASSF3Q86WH2 238 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 ETFBKMTQ8IXQ9 262 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 TRIML1Q8N9V2 468 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 DDX1Q92499 740 aaKnown RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 TATDN2Q93075 761 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 NT5C1BQ96P26 610 aa19.86■□□□□ 0.77
TMEM53-201ENST00000372235 OLA1Q9NTK5 396 aaKnown RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
TMEM53-201ENST00000372235 TRIM49BA6NDI0 452 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 XPO1O14980 1071 aaKnown RBP19.85■□□□□ 0.77
TMEM53-201ENST00000372235 PAEPP09466 180 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 BST2Q10589 180 aaKnown RBP19.85■□□□□ 0.77
TMEM53-201ENST00000372235 SDE2Q6IQ49 451 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 RSRC2Q7L4I2 434 aaKnown RBP19.85■□□□□ 0.77
TMEM53-201ENST00000372235 PIGZQ86VD9 579 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 C12orf50Q8NA57 414 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-201ENST00000372235 ERCC4Q92889 916 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-201ENST00000372235 BBS2Q9BXC9 721 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 NMUR1Q9HB89 426 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 LRRC4Q9HBW1 653 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 PARD6AQ9NPB6 346 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 STARD13Q9Y3M8 1113 aa19.85■□□□□ 0.77
TMEM53-201ENST00000372235 SCAMP3O14828 347 aaKnown RBP19.84■□□□□ 0.77
TMEM53-201ENST00000372235 CACNG3O60359 315 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TULP3O75386 442 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TBX18O95935 607 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 ZBED1O96006 694 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 ZNF806P0C7X5 589 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 SETSIPP0DME0 302 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TIE1P35590 1138 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 MORC3Q14149 939 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 GRAMD4Q6IC98 578 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 KBTBD6Q86V97 674 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TMEM25Q86YD3 366 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TERB1Q8NA31 727 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 IL17RCQ8NAC3 791 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 NELFBQ8WX92 580 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 SPACA7Q96KW9 195 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 IPO9Q96P70 1041 aaKnown RBP19.84■□□□□ 0.77
TMEM53-201ENST00000372235 ARID3AQ99856 593 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 OSER1Q9NX31 292 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 TSPAN16Q9UKR8 245 aa19.84■□□□□ 0.77
TMEM53-201ENST00000372235 NEDD8-MDP1E9PL57 170 aa19.83■□□□□ 0.77
TMEM53-201ENST00000372235 GREM1O60565 184 aa19.83■□□□□ 0.77
TMEM53-201ENST00000372235 KLF8O95600 359 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms