RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ACTL7BQ9Y614 415 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 ADAMTS3O15072 1205 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SNPHO15079 494 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 FOXP2O15409 715 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 TNNC2P02585 160 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 CCNA2P20248 432 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 LIG4P49917 911 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 BCAP31P51572 246 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 MTX3Q5HYI7 312 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
PTPN1-201ENST00000371621 PPIL6Q8IXY8 311 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 COG5Q9UP83 839 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 PCDHA3Q9Y5H8 950 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 KPNA7A9QM74 516 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 TCEA1P23193 301 aaKnown RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 BTDP43251 543 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 PLIN5Q00G26 463 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 EBF4Q9BQW3 602 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 C1orf50Q9BV19 199 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 FOXP3Q9BZS1 431 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 GPRC5DQ9NZD1 345 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 POMPQ9Y244 141 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 PFDN6O15212 129 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 GLRBP48167 497 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 SLC1A6P48664 564 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CBWD6Q4V339 395 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CBWD3Q5JTY5 395 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CBWD5Q5RIA9 395 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ARHGAP27Q6ZUM4 889 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 APOPT1Q96IL0 206 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 SEPHS2Q99611 448 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 BAG5Q9UL15 447 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 PMF1-BGLAPU3KQ54 211 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 TECPR2O15040 1411 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 NAT1P18440 290 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 OSBPP22059 807 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 POLR2BP30876 1174 aaKnown RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 IFNA8P32881 189 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 RFC4P35249 363 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 GNL1P36915 607 aaPredicted RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CENPCQ03188 943 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CCNG2Q16589 344 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ARSHQ5FYA8 562 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 DCAF12L1Q5VU92 463 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 ACTL9Q8TC94 416 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 OSCP1Q8WVF1 389 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 MMP19Q99542 508 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 HERC2P3Q9BVR0 1158 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CLK4Q9HAZ1 481 aaKnown RBP12.16□□□□□ -0.46
PTPN1-201ENST00000371621 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 OVOS2A0A0J9YW53 1432 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 OVOS2Q6IE36 1432 aa12.16□□□□□ -0.46
PTPN1-201ENST00000371621 CEP170BQ9Y4F5 1589 aaPredicted RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 CSDE1O75534 798 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 GNA15P30679 374 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PTGIRP43119 386 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 CDH6P55285 790 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 ERI1Q8IV48 349 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 OR8H2Q8N162 312 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PIWIL2Q8TC59 973 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PSMD13Q9UNM6 376 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 MYH13Q9UKX3 1938 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PNPLA7Q6ZV29 1317 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 GOLGA4Q13439 2230 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FAM155BO75949 473 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 RPS8P62241 208 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PRKG1Q13976 671 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 POLD3Q15054 466 aaPredicted RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 EPHA7Q15375 998 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TBCELQ5QJ74 424 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 OFCC1Q8IZS5 231 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FBXO27Q8NI29 283 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 RSPH1Q8WYR4 309 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TMEM109Q9BVC6 243 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 FRMD8Q9BZ67 464 aaPredicted RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
PTPN1-201ENST00000371621 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 RALBP11234 206 aa12.15□□□□□ -0.46
PTPN1-201ENST00000371621 CDK8P49336 464 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms