RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MPP3Q13368 585 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ACOT9Q9Y305 439 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 MEGF6O75095 1541 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 M0QYT0 321 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 UBDO15205 165 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 RHOBTB1O94844 696 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 BCL10O95999 233 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 CD4P01730 458 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 MPOP05164 745 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ABHD2P08910 425 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ANPEPP15144 967 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ME2P23368 584 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 RIPK1Q13546 671 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 SLC30A10Q6XR72 485 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 MARK2Q7KZI7 788 aaKnown RBP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 PATL1Q86TB9 770 aaKnown RBP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 EPS8L1Q8TE68 723 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 UBE2OQ9C0C9 1292 aaKnown RBP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 DAPK2Q9UIK4 370 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 NCAM1P13591 858 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 ETS1P14921 441 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 IL31Q6EBC2 164 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 SNX32Q86XE0 403 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL17A1-202ENST00000369733 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 MMRN1Q13201 1228 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 GSTA3Q16772 222 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 PARP6Q2NL67 630 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 COLGALT1Q8NBJ5 622 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 KAT2BQ92831 832 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 AP4E1Q9UPM8 1137 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 SLC8A2Q9UPR5 921 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
COL17A1-202ENST00000369733 A8MUI8 341 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 CYP1A2P05177 515 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 FASP25445 335 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 PRKAA1Q13131 559 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 ZNF333Q96JL9 665 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 BBS2Q9BXC9 721 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 A1CFQ9NQ94 594 aaKnown RBP16.39■□□□□ 0.22
COL17A1-202ENST00000369733 RPL26L1Q9UNX3 145 aaKnown RBP16.39■□□□□ 0.22
COL17A1-202ENST00000369733 PKP3Q9Y446 797 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 COMMD3-BMI1R4GMX3 469 aa16.39■□□□□ 0.22
COL17A1-202ENST00000369733 C1orf232A0A0U1RR37 186 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 WDR27A2RRH5 827 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 RBAK-RBAKDNI3L0D1 243 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 POU4F1Q01851 419 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 KCTD21Q4G0X4 260 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SLCO1B3Q9NPD5 702 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 DPP3Q9NY33 737 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 GJB6O95452 261 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 RARBP10826 455 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 TPP2P29144 1249 aaPredicted RBP16.39■□□□□ 0.21
COL17A1-202ENST00000369733 EIF2B2P49770 351 aaKnown RBP16.39■□□□□ 0.21
COL17A1-202ENST00000369733 RIPOR1Q6ZS17 1223 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 WNT7AO00755 349 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 MAGEB2O15479 319 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SOAT2O75908 522 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 CYP2F1P24903 491 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 ALDH1A3P47895 512 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 C21orf59P57076 290 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SLC25A3Q00325 362 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 PLIN5Q00G26 463 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 ASB14A6NK59 587 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 TRIM13O60858 407 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 PDK3Q15120 406 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SGO1Q5FBB7 561 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
COL17A1-202ENST00000369733 KAT5Q92993 513 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
COL17A1-202ENST00000369733 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
COL17A1-202ENST00000369733 APOL2Q9BQE5 337 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 TMEM161AQ9NX61 479 aa16.39■□□□□ 0.21
COL17A1-202ENST00000369733 OCM2P0CE71 109 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 OCMP0CE72 109 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 MRPS22P82650 360 aaKnown RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 RRM2BQ7LG56 351 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 OTOP1Q7RTM1 612 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DHFR2Q86XF0 187 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ZSCAN18Q8TBC5 510 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ACER1Q8TDN7 264 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 KIAA1257Q9ULG3 409 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ZNF197O14709 1029 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ATP6V1B2P21281 511 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms