RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 PDAP1Q13442 181 aaKnown RBP16.77■□□□□ 0.28
CHD1L-203ENST00000369259 ADGRE1Q14246 886 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 ACAP1Q15027 740 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 AOC3Q16853 763 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 PPP1R14CQ8TAE6 165 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 ZNF778Q96MU6 729 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 LIN28AQ9H9Z2 209 aaKnown RBP16.77■□□□□ 0.28
CHD1L-203ENST00000369259 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
CHD1L-203ENST00000369259 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.28
CHD1L-203ENST00000369259 DAGLAQ9Y4D2 1042 aa16.77■□□□□ 0.28
CHD1L-203ENST00000369259 F8VP50 259 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 RAB15P59190 212 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 C16orf72Q14CZ0 275 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 C15orf52Q6ZUT6 534 aaKnown RBP16.77■□□□□ 0.27
CHD1L-203ENST00000369259 LPCAT2Q7L5N7 544 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 TRIML2Q8N7C3 387 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 FRMD8P1Q9BZ68 369 aaPredicted RBP16.77■□□□□ 0.27
CHD1L-203ENST00000369259 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.27
CHD1L-203ENST00000369259 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.27
CHD1L-203ENST00000369259 LOC100653049A0A140TA62 436 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 TOM1L1O75674 476 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 KRT34O76011 436 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 C1QAP02745 245 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 ALDH2P05091 517 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 PDGFRBP09619 1106 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 ALOX15P16050 662 aaPredicted RBP16.76■□□□□ 0.27
CHD1L-203ENST00000369259 SSTR3P32745 418 aaPredicted RBP16.76■□□□□ 0.27
CHD1L-203ENST00000369259 KCNQ4P56696 695 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 NUP107P57740 925 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 CDKL1Q00532 357 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 ZNF252P-AS1Q0IIN9 211 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 FRMD7Q6ZUT3 714 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 SLC15A3Q8IY34 581 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 TSPAN14Q8NG11 270 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 TRIM56Q9BRZ2 755 aaKnown RBP16.76■□□□□ 0.27
CHD1L-203ENST00000369259 IFT122Q9HBG6 1241 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
CHD1L-203ENST00000369259 SLC16A4O15374 487 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 MYL4P12829 197 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 CRHR1P34998 444 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 CCR3P51677 355 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 PFKPQ01813 784 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 PEX6Q13608 980 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 PDPK2PQ6A1A2 396 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 USP37Q86T82 979 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 COX4I2Q96KJ9 171 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 CSRNP1Q96S65 589 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 CCT7Q99832 543 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 SLC2A11Q9BYW1 496 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 KLC2Q9H0B6 622 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
CHD1L-203ENST00000369259 RIMS3Q9UJD0 308 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 ARHGAP26Q9UNA1 814 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 SBF2Q86WG5 1849 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 ADCY6O43306 1168 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 LYPLA1O75608 230 aaPredicted RBP16.75■□□□□ 0.27
CHD1L-203ENST00000369259 ZBED1O96006 694 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 P4HBP07237 508 aaKnown RBP16.75■□□□□ 0.27
CHD1L-203ENST00000369259 ALDH3B2P48448 385 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 DPYSL3Q14195 570 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 NFIXQ14938 502 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 UNC45BQ8IWX7 931 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 NDUFAF2Q8N183 169 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 TMIGD2Q96BF3 282 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 CFAP36Q96G28 342 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 MMP19Q99542 508 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 ZNF577Q9BSK1 485 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 STK39Q9UEW8 545 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 TTLL3Q9Y4R7 772 aa16.75■□□□□ 0.27
CHD1L-203ENST00000369259 HTR3EA5X5Y0 456 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 CXorf49A8MYA2 514 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 MATN2O00339 956 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 HALP42357 657 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 PHKA2P46019 1235 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 IDH3AP50213 366 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 BMPR2Q13873 1038 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 PPP1R2P3Q6NXS1 205 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 ZFP1Q6P2D0 407 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 HNRNPABQ99729 332 aaKnown RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 TEKT3Q9BXF9 490 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 COL6A2P12110 1019 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 IL1R1P14778 569 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 PRDX6P30041 224 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 CYP24A1Q07973 514 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 IKQ13123 557 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 PDK1Q15118 436 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 TEDDM1Q5T9Z0 273 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 RSPH3Q86UC2 560 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 FAM71DQ8N9W8 422 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 TRPC4APQ8TEL6 797 aa16.74■□□□□ 0.27
CHD1L-203ENST00000369259 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 INO80BQ9C086 356 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-203ENST00000369259 FAM96AQ9H5X1 160 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms