RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 WBP2Q969T9 261 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 SMARCD1Q96GM5 515 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 TNIP3Q96KP6 325 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 VRTNQ9H8Y1 702 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 TMEM9BQ9NQ34 198 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 KRT82Q9NSB4 513 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 PCDHA7Q9UN72 937 aa10.96□□□□□ -0.65
CLRN3-201ENST00000368671 ATXN2Q99700 1313 aaKnown RBP10.95□□□□□ -0.66
CLRN3-201ENST00000368671 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 TBC1D3BA6NDS4 549 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 BEST1O76090 585 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 VNN1O95497 513 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 F13A1P00488 732 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 C4BPAP04003 597 aaKnown RBP10.95□□□□□ -0.66
CLRN3-201ENST00000368671 ZSCAN22P10073 491 aaPredicted RBP10.95□□□□□ -0.66
CLRN3-201ENST00000368671 CD46P15529 392 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 TNFRSF4P43489 277 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 AP3M2P53677 418 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 MAP3K7CLP57077 242 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 DLG4P78352 724 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 ZNF252P-AS1Q0IIN9 211 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 FOXC1Q12948 553 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 UAP1L1Q3KQV9 507 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 HSF5Q4G112 596 aaPredicted RBP10.95□□□□□ -0.66
CLRN3-201ENST00000368671 C10orf76Q5T2E6 689 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 SH3PXD2AQ5TCZ1 1133 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 RESP18Q5W5W9 173 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 LPCAT2Q7L5N7 544 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 TMEFF1Q8IYR6 380 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 GOLGA5Q8TBA6 731 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 PARD3BQ8TEW8 1205 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 JAKMIP2Q96AA8 810 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 OTUB2Q96DC9 234 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 BACH2Q9BYV9 841 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 FAM49BQ9NUQ9 324 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 EXOC1Q9NV70 894 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 HMGXB4Q9UGU5 601 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 PCDHB3Q9Y5E6 796 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 MYOFQ9NZM1 2061 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 MYH10P35580 1976 aa10.95□□□□□ -0.66
CLRN3-201ENST00000368671 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 CDX4O14627 284 aaPredicted RBP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 HOXC11O43248 304 aaPredicted RBP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 KLRC4O43908 158 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ADAM23O75077 832 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 TULP3O75386 442 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 P4HA1P13674 534 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ADORA2BP29275 332 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 PIK3CAP42336 1068 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 WASP42768 502 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 PGFP49763 221 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 TUBP50607 506 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 NDST1P52848 882 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 IRX4P78413 519 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SHC2P98077 582 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 STK4Q13043 487 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 TRIM61Q5EBN2 209 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 CEP135Q66GS9 1140 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SPOPLQ6IQ16 392 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 TMEM25Q86YD3 366 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ETFBKMTQ8IXQ9 262 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 DEFB119Q8N690 84 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 KIAA0895Q8NCT3 520 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ZMIZ2Q8NF64 920 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SLC2A14Q8TDB8 520 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 ERLEC1Q96DZ1 483 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SMOQ99835 787 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 SPHK2Q9NRA0 654 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 COMMD8Q9NX08 183 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 DEC1Q9P2X7 70 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
CLRN3-201ENST00000368671 CEP192Q8TEP8 1941 aa10.94□□□□□ -0.66
CLRN3-201ENST00000368671 A0A0A0MRY4 1105 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TRIM24O15164 1050 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TLR5O60602 858 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 NR3C1P04150 777 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 ZDHHC11BP0C7U3 371 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 HOXB2P14652 356 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 SPINK2P20155 84 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 PTGER3P43115 390 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 MAPK8P45983 427 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 GCGRP47871 477 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 CLDN10P78369 228 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 DNM1Q05193 864 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 BYSLQ13895 437 aaKnown RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 SGSM1Q2NKQ1 1148 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 MAP7D1Q3KQU3 841 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 ZACNQ401N2 412 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 PREPLQ4J6C6 727 aaPredicted RBP10.93□□□□□ -0.66
CLRN3-201ENST00000368671 LYSMD4Q5XG99 296 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
CLRN3-201ENST00000368671 TRMT11Q7Z4G4 463 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms