RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
TPM3-211ENST00000368531 SMPD4Q9NXE4 827 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 GDE1Q9NZC3 331 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 LIMD1Q9UGP4 676 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 NCANO14594 1321 aa14.57□□□□□ -0.08
TPM3-211ENST00000368531 SSU72P8A0A1W2PR75 194 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 CAPN9O14815 690 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 RTN2O75298 545 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 GJB6O95452 261 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 MBL2P11226 248 aaPredicted RBP14.56□□□□□ -0.08
TPM3-211ENST00000368531 DDX6P26196 483 aaKnown RBP eCLIP14.56□□□□□ -0.08
TPM3-211ENST00000368531 AVPR1AP37288 418 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 GABRB2P47870 512 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 PSEN1P49768 467 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 EFEMP1Q12805 493 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 PTP4A2Q12974 167 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 FAM102AQ5T9C2 384 aaPredicted RBP14.56□□□□□ -0.08
TPM3-211ENST00000368531 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 OLFML1Q6UWY5 402 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 TOGARAM2Q6ZUX3 1019 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 MON1BQ7L1V2 547 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 MCOLN2Q8IZK6 566 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 CMTM8Q8IZV2 173 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 SCML4Q8N228 414 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 SPTLC3Q9NUV7 552 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 RASAL2Q9UJF2 1139 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 NAALADL1Q9UQQ1 740 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 USTQ9Y2C2 406 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 EYSQ5T1H1 3165 aa14.56□□□□□ -0.08
TPM3-211ENST00000368531 SART1O43290 800 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 OAS1P00973 400 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 CALB1P05937 261 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 GZMAP12544 262 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 NCAM1P13591 858 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ABCB4P21439 1286 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ATP5C1P36542 298 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 VIPR2P41587 438 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 YWHAZP63104 245 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 CDK17Q00537 523 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ZNF268Q14587 947 aaPredicted RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 EFHC1Q5JVL4 640 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ALKBH5Q6P6C2 394 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 PARM1Q6UWI2 310 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 MIB1Q86YT6 1006 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ADHFE1Q8IWW8 467 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 RSAD2Q8WXG1 361 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 SMARCD2Q92925 531 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ASB16Q96NS5 453 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 NECAB3Q96P71 396 aaPredicted RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 METTL5Q9NRN9 209 aaKnown RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 ABCC13Q9NSE7 274 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 CLIC5Q9NZA1 410 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 MYO1AQ9UBC5 1043 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 SFMBT1Q9UHJ3 866 aa14.55□□□□□ -0.08
TPM3-211ENST00000368531 ZFP37Q9Y6Q3 630 aaPredicted RBP14.55□□□□□ -0.08
TPM3-211ENST00000368531 MYO10Q9HD67 2058 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 SOWAHDA6NJG2 315 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 DPYSL4O14531 572 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 SCAMP3O14828 347 aaKnown RBP14.54□□□□□ -0.08
TPM3-211ENST00000368531 FYNP06241 537 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ASGR2P07307 311 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 HMBSP08397 361 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 IRF1P10914 325 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 RRM1P23921 792 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 TUBP50607 506 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 GSDMDP57764 484 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ZP2Q05996 745 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 SLC18A3Q16572 532 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ASTE1Q2TB18 679 aaPredicted RBP14.54□□□□□ -0.08
TPM3-211ENST00000368531 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 SYPL2Q5VXT5 272 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 TANGO2Q6ICL3 276 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ZDHHC17Q8IUH5 632 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 DEFB106AQ8N104 65 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ADAM32Q8TC27 787 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 FGF14Q92915 247 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 KHSRPQ92945 711 aaKnown RBP eCLIP14.54□□□□□ -0.08
TPM3-211ENST00000368531 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
TPM3-211ENST00000368531 ZNF653Q96CK0 615 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 BAG1Q99933 345 aaPredicted RBP14.54□□□□□ -0.08
TPM3-211ENST00000368531 RPP25Q9BUL9 199 aaKnown RBP14.54□□□□□ -0.08
TPM3-211ENST00000368531 SELENOOQ9BVL4 669 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 PLA2G2FQ9BZM2 168 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ISCUQ9H1K1 167 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 POPDC2Q9HBU9 364 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 ZFP14Q9HCL3 533 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 GKN1Q9NS71 199 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 TDP1Q9NUW8 608 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 MARCH2Q9P0N8 246 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 PRKAG3Q9UGI9 489 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 DNMT3LQ9UJW3 386 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 STRIP2Q9ULQ0 834 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 CCL26Q9Y258 94 aa14.54□□□□□ -0.08
TPM3-211ENST00000368531 CPQQ9Y646 472 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms