RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PCDHGA2Q9Y5H1 932 aa19.93■□□□□ 0.78
CKS1B-203ENST00000368439 FAM186AA6NE01 2351 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 GABBR2O75899 941 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 SLC9A1P19634 815 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 CNGA2Q16280 664 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 TRIM65Q6PJ69 517 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 ZC3H14Q6PJT7 736 aaKnown RBP19.92■□□□□ 0.78
CKS1B-203ENST00000368439 SLC35F5Q8WV83 523 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 KCTD13Q8WZ19 329 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 CRACR2AQ9BSW2 395 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 ULBP1Q9BZM6 244 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 SH3BP1Q9Y3L3 701 aa19.92■□□□□ 0.78
CKS1B-203ENST00000368439 GTPBP10A4D1E9 387 aaKnown RBP19.91■□□□□ 0.78
CKS1B-203ENST00000368439 CHURC1-FNTBB4DL54 471 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 RNF40O75150 1001 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 SETSIPP0DME0 302 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 IRF1P10914 325 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 BRD2P25440 801 aaKnown RBP19.91■□□□□ 0.78
CKS1B-203ENST00000368439 SLC6A11P48066 632 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 SLC8A3P57103 927 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 APBA1Q02410 837 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 MESP2Q0VG99 397 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 C10orf120Q5SQS8 335 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 GJB7Q6PEY0 223 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 C12orf40Q86WS4 652 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 CREBRFQ8IUR6 639 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 NDRG1Q92597 394 aaKnown RBP19.91■□□□□ 0.78
CKS1B-203ENST00000368439 UBE2TQ9NPD8 197 aaPredicted RBP19.91■□□□□ 0.78
CKS1B-203ENST00000368439 DACH1Q9UI36 760 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 DNMT3LQ9UJW3 386 aa19.91■□□□□ 0.78
CKS1B-203ENST00000368439 OTOGLQ3ZCN5 2332 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 K7EQS6 105 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 ZBED1O96006 694 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 CHRM1P11229 460 aaPredicted RBP19.9■□□□□ 0.78
CKS1B-203ENST00000368439 RALAP11233 206 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 MTIF2P46199 727 aaKnown RBP19.9■□□□□ 0.78
CKS1B-203ENST00000368439 YWHAGP61981 247 aaKnown RBP eCLIP19.9■□□□□ 0.78
CKS1B-203ENST00000368439 DMWDQ09019 674 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 MAN2A1Q16706 1144 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 FBXO43Q4G163 708 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 CT47A1Q5JQC4 288 aaPredicted RBP19.9■□□□□ 0.78
CKS1B-203ENST00000368439 MIIPQ5JXC2 388 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 LY6G5CQ5SRR4 150 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 DPY19L2P1Q6NXN4 242 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 PMF1Q6P1K2 205 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 SCML4Q8N228 414 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 SUMF1Q8NBK3 374 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 SECISBP2LQ93073 1101 aaKnown RBP19.9■□□□□ 0.78
CKS1B-203ENST00000368439 EXOC4Q96A65 974 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 SIX2Q9NPC8 291 aa19.9■□□□□ 0.78
CKS1B-203ENST00000368439 WDR87Q6ZQQ6 2873 aa19.89■□□□□ 0.78
CKS1B-203ENST00000368439 ANTXRLA6NF34 631 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 ADH1CP00326 375 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 LMNAP02545 664 aaKnown RBP19.89■□□□□ 0.77
CKS1B-203ENST00000368439 ADH5P11766 374 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 PON1P27169 355 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 HOXA6P31267 233 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 EIF2DP41214 584 aaKnown RBP19.89■□□□□ 0.77
CKS1B-203ENST00000368439 EML5Q05BV3 1969 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 ADIGQ0VDE8 80 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 PPP2R5DQ14738 602 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 STILQ15468 1287 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 TPD52L1Q16890 204 aaPredicted RBP19.89■□□□□ 0.77
CKS1B-203ENST00000368439 GBP6Q6ZN66 633 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 Q6ZNB5 142 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 TADA2BQ86TJ2 420 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 TMEM25Q86YD3 366 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 ETFBKMTQ8IXQ9 262 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 ARHGAP18Q8N392 663 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 PHTF2Q8N3S3 785 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 LRRC4Q9HBW1 653 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 SPHK2Q9NRA0 654 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 SAMSN1Q9NSI8 373 aaKnown RBP19.89■□□□□ 0.77
CKS1B-203ENST00000368439 POLR3BQ9NW08 1133 aaPredicted RBP19.89■□□□□ 0.77
CKS1B-203ENST00000368439 CFAP54Q96N23 3096 aa19.89■□□□□ 0.77
CKS1B-203ENST00000368439 FRYLO94915 3013 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 A0A0A0MRY4 1105 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 BECN2A8MW95 431 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 M0QYV0 167 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 HOXC11O43248 304 aaPredicted RBP19.88■□□□□ 0.77
CKS1B-203ENST00000368439 STC2O76061 302 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 KLKB1P03952 638 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 NRLP54845 237 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 GAD2Q05329 585 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 EXOC3L4Q17RC7 722 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 HSP90AA4PQ58FG1 418 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 ENOSF1Q7L5Y1 443 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 MIB1Q86YT6 1006 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 FAM114A1Q8IWE2 563 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 SFTPA1Q8IWL2 248 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 ATRIPQ8WXE1 791 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 CDK5RAP1Q96SZ6 601 aaKnown RBP19.88■□□□□ 0.77
CKS1B-203ENST00000368439 APEX2Q9UBZ4 518 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 AJAP1Q9UKB5 411 aaPredicted RBP19.88■□□□□ 0.77
CKS1B-203ENST00000368439 GPR179Q6PRD1 2367 aa19.88■□□□□ 0.77
CKS1B-203ENST00000368439 GVINP1Q7Z2Y8 2422 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 PTPRZ1P23471 2315 aaPredicted RBP19.87■□□□□ 0.77
CKS1B-203ENST00000368439 ZNF292O60281 2723 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 YJEFN3A6XGL0 299 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 E7ENQ6 273 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms