RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 MORF4L2Q15014 288 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 SUPT20HL1Q3ZLR7 823 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 DENND5BQ6ZUT9 1274 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 ACOT1Q86TX2 421 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 GSTCDQ8NEC7 633 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CCHCR1Q8TD31 782 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 RXFP2Q8WXD0 754 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CLMNQ96JQ2 1002 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TSC22D3Q99576 134 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 NIF3L1Q9GZT8 377 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 VPS11Q9H270 941 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CXCL16Q9H2A7 254 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 C17orf75Q9HAS0 396 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 UBP1Q9NZI7 540 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 STARD13Q9Y3M8 1113 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 COL2A1P02458 1487 aaPredicted RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 OPHN1O60890 802 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CALB1P05937 261 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 LINGO3P0C6S8 592 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PTPN4P29074 926 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 BCAR1P56945 870 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 STXBP2Q15833 593 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PPM1JQ5JR12 505 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 RALGPS1Q5JS13 557 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 RASIP1Q5U651 963 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CTU1Q7Z7A3 348 aaKnown RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PNPLA1Q8N8W4 532 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PHC3Q8NDX5 983 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TMEM174Q8WUU8 243 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 NRG4Q8WWG1 115 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 GPRASP2Q96D09 838 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PEBP4Q96S96 227 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 CGRRF1Q99675 332 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 SH3GL3Q99963 347 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 C20orf27Q9GZN8 174 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 FAM49AQ9H0Q0 323 aaPredicted RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 CACNG4Q9UBN1 327 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 SMG5Q9UPR3 1016 aaKnown RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 ZNF646O15015 1829 aaPredicted RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 ALOX15BO15296 676 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TYROBPO43914 113 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 NPTXRO95502 500 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 UBA1P22314 1058 aaKnown RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 PDE1BQ01064 536 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PTP4A2Q12974 167 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 OASLQ15646 514 aaKnown RBP9.22□□□□□ -0.93
THBS3-201ENST00000368378 ABHD15Q6UXT9 468 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 PPFIBP2Q8ND30 876 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 DENND1AQ8TEH3 1009 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 DEPDC1BQ8WUY9 529 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 AZIN2Q96A70 460 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 NSL1Q96IY1 281 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 MARK4Q96L34 752 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 TTC25Q96NG3 672 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 SNX9Q9Y5X1 595 aa9.22□□□□□ -0.93
THBS3-201ENST00000368378 GSC2O15499 205 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 DKC1O60832 514 aaKnown RBP eCLIP9.21□□□□□ -0.93
THBS3-201ENST00000368378 ADORA2AP29274 412 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 BACE1P56817 501 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 KLC1Q07866 573 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 LAMTOR4Q0VGL1 99 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 LPCAT4Q643R3 524 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 IZUMO2Q6UXV1 221 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 C4orf50Q6ZRC1 276 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.93
THBS3-201ENST00000368378 DCLK2Q8N568 766 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 TEX9Q8N6V9 391 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 SNX31Q8N9S9 440 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 ZNF280CQ8ND82 737 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 RBM15BQ8NDT2 890 aaKnown RBP9.21□□□□□ -0.93
THBS3-201ENST00000368378 ANKRD36BP1Q96IX9 119 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 TEPSINQ96N21 525 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 LRMDAQ9H2I8 198 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 ACAD9Q9H845 621 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 PCDH9Q9HC56 1237 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 LGALS13Q9UHV8 139 aa9.21□□□□□ -0.93
THBS3-201ENST00000368378 IQANK1A0A1B0GTG1 560 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 A0A1B0GVG6 124 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 CCDC22O60826 627 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 SMNDC1O75940 238 aaKnown RBP eCLIP9.21□□□□□ -0.94
THBS3-201ENST00000368378 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
THBS3-201ENST00000368378 GBE1Q04446 702 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 BTKQ06187 659 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
THBS3-201ENST00000368378 TREML2Q5T2D2 321 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 TRIM72Q6ZMU5 477 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 PTAR1Q7Z6K3 402 aaPredicted RBP9.21□□□□□ -0.94
THBS3-201ENST00000368378 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 PHF13Q86YI8 300 aaPredicted RBP9.21□□□□□ -0.94
THBS3-201ENST00000368378 SPATA6LQ8N4H0 392 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 ARL10Q8N8L6 244 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 SMC1BQ8NDV3 1235 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 GRAMD1AQ96CP6 724 aa9.21□□□□□ -0.94
THBS3-201ENST00000368378 OXNAD1Q96HP4 312 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms