RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PDGFCQ9NRA1 345 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 RIC8BQ9NVN3 520 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 PLA2G4CQ9UP65 541 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 GOLGA8TH3BQL2 631 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 SPAG6O75602 509 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 MED8Q96G25 268 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 VMP1Q96GC9 406 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 LACRTQ9GZZ8 138 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 O00370 1275 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PTPRAP18433 802 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 MLH1P40692 756 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CASP7P55210 303 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PDK2Q15119 407 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 SLC27A1Q6PCB7 646 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 DOK6Q6PKX4 331 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 COL5A2P05997 1499 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 SDR42E2A6NKP2 422 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 IRF6O14896 467 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PLA2G6O60733 806 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CPSF4O95639 269 aaKnown RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 AGAP9Q5VTM2 703 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 UGT3A1Q6NUS8 523 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 BTNL9Q6UXG8 535 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 PLEKHA8Q96JA3 519 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 BCL9O00512 1426 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.289e-11■□□□□ 11.3
PTPRK-207ENST00000368226 AMPD1P23109 780 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 OR1E1P30953 314 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CAPZA2P47755 286 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 SLC26A2P50443 739 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CAMK2GQ13555 558 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 ADAM2Q99965 735 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CLPBQ9H078 707 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 RBM22Q9NW64 420 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 STAU1O95793 577 aaKnown RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CHI3L1P36222 383 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 CCL23P55773 120 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 TBX4P57082 545 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 TTLL9Q3SXZ7 439 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 RUBCNQ92622 972 aa13.3□□□□□ -0.28
PTPRK-207ENST00000368226 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-207ENST00000368226 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 LGALS2P05162 132 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 MMGT1Q8N4V1 131 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 GAD1Q99259 594 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CNPY3Q9BT09 278 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 EIF2AQ9BY44 585 aaKnown RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 SH3BGRLO75368 114 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 KATNA1O75449 491 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 ERMARDQ5T6L9 678 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 TRPM8Q7Z2W7 1104 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 MYO1HQ8N1T3 1032 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CARD9Q9H257 536 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 HMX1Q9NP08 348 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CXCL11O14625 94 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CYTH3O43739 400 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 FNTAP49354 379 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 TUBP50607 506 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 DLG4P78352 724 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 TRIP10Q15642 601 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 LRRC34Q8IZ02 419 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 FAM129AQ9BZQ8 928 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 F9P00740 461 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 MLNP12872 115 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 GPC1P35052 558 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 LGI2Q8N0V4 545 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 LPPQ93052 612 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 VPS33BQ9H267 617 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 ABHD16BQ9H3Z7 469 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 CDY1Q9Y6F8 540 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 TBC1D4O60343 1298 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 PROSCO94903 275 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 GJB1P08034 283 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 KCTD19Q17RG1 926 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-207ENST00000368226 B3GALNT2Q8NCR0 500 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 SLC5A5Q92911 643 aa13.29□□□□□ -0.28
PTPRK-207ENST00000368226 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms