RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 E2F8A0AVK6 867 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 KBTBD13C9JR72 458 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 F9P00740 461 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ERFP50548 548 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 DAB2P98082 770 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 MRPL28Q13084 256 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ADCK1Q86TW2 530 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 IRF2BP1Q8IU81 584 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 GPC2Q8N158 579 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TERB1Q8NA31 727 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ABI2Q9NYB9 513 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 RCCD1A6NED2 376 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 GPR182O15218 404 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TLR2O60603 784 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 MYL2P10916 166 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 VCPP55072 806 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 C16orf72Q14CZ0 275 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 SLC9A9Q8IVB4 645 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 PORCNQ9H237 461 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 GBA2Q9HCG7 927 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 AP4E1Q9UPM8 1137 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TRADDQ15628 312 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 CHI3L2Q15782 390 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 CHSY1Q86X52 802 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TRIM54Q9BYV2 358 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 RAD21L1Q9H4I0 556 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 PCDH9Q9HC56 1237 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 NDST1P52848 882 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 CBX3Q13185 183 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SNX17Q15036 470 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ECM1Q16610 540 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ANGPTL8Q6UXH0 198 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DENND5BQ6ZUT9 1274 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ARID3BQ8IVW6 561 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SLC25A41Q8N5S1 370 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 IL31RAQ8NI17 732 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 GANCQ8TET4 914 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 PPP2R3CQ969Q6 453 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SLITRK1Q96PX8 696 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DLG5Q8TDM6 1919 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 A0A1B0GW55 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 UPP2O95045 317 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 UBA1P22314 1058 aaKnown RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 PDAP1Q13442 181 aaKnown RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 GRIK4Q16099 956 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 CNBD2Q96M20 576 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SLC39A10Q9ULF5 831 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 DPYSL4O14531 572 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 PBX1P40424 430 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 KCTD21Q4G0X4 260 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 HYIQ5T013 277 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 CCDC33Q8N5R6 958 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 TMEM161BQ8NDZ6 487 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 NAT9Q9BTE0 207 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 NKRFO15226 690 aaKnown RBP eCLIP13.69□□□□□ -0.229e-11■□□□□ 11.3
PTPRK-204ENST00000368210 NDUFS3O75489 264 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ANXA9O76027 345 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 PPATQ06203 517 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 LINC00523Q86TU6 105 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SNTG2Q9NY99 539 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 PHTF1Q9UMS5 762 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-204ENST00000368210 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
PTPRK-204ENST00000368210 B2RBV5 119 aa13.68□□□□□ -0.22
PTPRK-204ENST00000368210 ZNF263O14978 683 aa13.68□□□□□ -0.22
PTPRK-204ENST00000368210 PMPCBO75439 489 aa13.68□□□□□ -0.22
PTPRK-204ENST00000368210 UBOX5O94941 541 aa13.68□□□□□ -0.22
PTPRK-204ENST00000368210 KLHL2O95198 593 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms