RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SDC4P31431 198 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 SLC6A3Q01959 620 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 OVGP1Q12889 678 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 NAA25Q14CX7 972 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 TPSAB1Q15661 275 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 GOLGA7BQ2TAP0 167 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 SH3PXD2AQ5TCZ1 1133 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 OLFML1Q6UWY5 402 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 C7orf26Q96N11 449 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ACAP3Q96P50 834 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 NUDCD1Q96RS6 583 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 SRPK1Q96SB4 655 aaKnown RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 TMEM120AQ9BXJ8 343 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 MMADHCQ9H3L0 296 aaPredicted RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 MROH8Q9H579 483 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 DCLRE1BQ9H816 532 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 DERAQ9Y315 318 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 LRRC42Q9Y546 428 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 A0A087WZ62 844 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 I3L4J1 428 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 GCATO75600 419 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 PIAS1O75925 651 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 KRT38O76015 456 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 ZBTB7AO95365 584 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 INSRRP14616 1297 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 RBL1P28749 1068 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 SCNN1AP37088 669 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 MAGEA3P43357 314 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 SERPINB9P50453 376 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 ZBTB16Q05516 673 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 LAMC2Q13753 1193 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 DBN1Q16643 649 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 PKDCCQ504Y2 493 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 ATG16L1Q676U5 607 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 CAND1Q86VP6 1230 aaKnown RBP14.84□□□□□ -0.03
CD48-201ENST00000368045 TEX9Q8N6V9 391 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 PPM1NQ8N819 430 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 PCDH19Q8TAB3 1148 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 FAM172AQ8WUF8 416 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 TTC17Q96AE7 1141 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 FDXACB1Q9BRP7 624 aaPredicted RBP14.84□□□□□ -0.03
CD48-201ENST00000368045 RNPEPQ9H4A4 650 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 KCNK13Q9HB14 408 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 KCNK4Q9NYG8 393 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 DONSONQ9NYP3 566 aa14.84□□□□□ -0.03
CD48-201ENST00000368045 NKX1-2Q9UD57 310 aaPredicted RBP14.84□□□□□ -0.03
CD48-201ENST00000368045 PTPRFP10586 1907 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 CAPN15O75808 1086 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 APOEP02649 317 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 ARF4P18085 180 aaPredicted RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 BGNP21810 368 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 PTPN9P43378 593 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 IREB2P48200 963 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 NR2C2P49116 596 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 NRLP54845 237 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 CYS1Q717R9 158 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 ARCQ7LC44 396 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 APBB1IPQ7Z5R6 666 aaPredicted RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 PRPF39Q86UA1 669 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 ERO1BQ86YB8 467 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 CTAGE3PQ8IX95 158 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.83□□□□□ -0.03
CD48-201ENST00000368045 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 COPS5Q92905 334 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 GCOM2Q9BZD3 368 aaPredicted RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 C12orf65Q9H3J6 166 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 DENND2DQ9H6A0 471 aaPredicted RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 PLEKHA5Q9HAU0 1116 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 PRDM16Q9HAZ2 1276 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 XAB2Q9HCS7 855 aaKnown RBP14.83□□□□□ -0.03
CD48-201ENST00000368045 PLLPQ9Y342 182 aa14.83□□□□□ -0.03
CD48-201ENST00000368045 GM2AP17900 193 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 CNTFP26441 200 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 GCKP35557 465 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 GRM5P41594 1212 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 MTM1Q13496 603 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 TAF11Q15544 211 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 CDO1Q16878 200 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 SCYL2Q6P3W7 929 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 C4orf50Q6ZRC1 276 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 DPH6Q7L8W6 267 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 VPS52Q8N1B4 723 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 ARHGAP24Q8N264 748 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 PIWIL1Q96J94 861 aaKnown RBP14.83□□□□□ -0.04
CD48-201ENST00000368045 MIPEPQ99797 713 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
CD48-201ENST00000368045 ALG13Q9NP73 1137 aaKnown RBP14.83□□□□□ -0.04
CD48-201ENST00000368045 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.04
CD48-201ENST00000368045 ARL8BQ9NVJ2 186 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 RBPJLQ9UBG7 517 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 HESX1Q9UBX0 185 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 KCNH4Q9UQ05 1017 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 AKT3Q9Y243 479 aa14.83□□□□□ -0.04
CD48-201ENST00000368045 HEY1Q9Y5J3 304 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms