RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FARSBQ9NSD9 589 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PDP2Q9P2J9 529 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 FMN2Q9NZ56 1722 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 A0A1W2PRG6 482 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TREHO43280 583 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 GSNP06396 782 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TGFB3P10600 412 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 EXOSC10Q01780 885 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 BNC1Q01954 994 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CACNB1Q02641 598 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CACNB2Q08289 660 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ACVR2BQ13705 512 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF662Q6ZS27 426 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PACS2Q86VP3 889 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 LARP4BQ92615 738 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ADA2Q9NZK5 511 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 NEMP2A6NFY4 417 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC22O60826 627 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 DLGAP3O95886 979 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 THEGLP0DJG4 465 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ADORA2BP29275 332 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 GGCXP38435 758 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 NLRP11P59045 1033 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 DYNLL1P63167 89 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CAMK2GQ13555 558 aaPredicted RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ADCK5Q3MIX3 580 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ATP13A4Q4VNC1 1196 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 LAYNQ6UX15 382 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF554Q86TJ5 538 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 PYROXD1Q8WU10 500 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 GTPBP2Q9BX10 602 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CFAP69A5D8W1 941 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 RASA4BC9J798 803 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CTIFO43310 598 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 RASA4O43374 803 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 HMBSP08397 361 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CYP2A6P11509 494 aaPredicted RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF24P17028 368 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 TWF1Q12792 350 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CAPRIN1Q14444 709 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 EPHA7Q15375 998 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 PKN1Q16512 942 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 HIF1AQ16665 826 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 FKBP1CQ5VVH2 108 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 EFCAB12Q6NXP0 572 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 APOA5Q6Q788 366 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 MYCBPAPQ8TBZ2 947 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 FAR2Q96K12 515 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 NELL2Q99435 816 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 CALN1Q9BXU9 219 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 GPR63Q9BZJ6 419 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 TM6SF1Q9BZW5 370 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 FBXO44Q9H4M3 255 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 SOX13Q9UN79 622 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 EFR3BQ9Y2G0 817 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 PKP3Q9Y446 797 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 NRKQ7Z2Y5 1582 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 KPNA7A9QM74 516 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 MAN2B1O00754 1011 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ACSL3O95573 720 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 VAMP7P51809 220 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 POLR2LP62875 67 aaKnown RBP8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ERVK-9P63128 1117 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 ERVK-24P63145 666 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 MFSD10Q14728 455 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 C10orf76Q5T2E6 689 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 DNERQ8NFT8 737 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 GPT2Q8TD30 523 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 TRPV5Q9NQA5 729 aa8.9□□□□□ -0.98
SYNE1-206ENST00000367253 PODXLO00592 558 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 ARIH2O95376 493 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 CXCR5P32302 372 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 SERPINB8P50452 374 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 TAS2R50P59544 299 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 MAGOHP61326 146 aaKnown RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF45Q02386 682 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 HIC1Q14526 733 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 USP41Q3LFD5 358 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF544Q6NX49 715 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 POTEAQ6S8J7 498 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 C10orf53Q8N6V4 93 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 SH3RF3Q8TEJ3 882 aaPredicted RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 ATP6V1G3Q96LB4 118 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 TMEM39BQ9GZU3 492 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 OSGEPL1Q9H4B0 414 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 TLR8Q9NR97 1041 aaKnown RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 PNO1Q9NRX1 252 aaKnown RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 SPATA6Q9NWH7 488 aaPredicted RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 TBC1D14Q9P2M4 693 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 SPASTQ9UBP0 616 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 RFX7Q2KHR2 1363 aa8.9□□□□□ -0.99
SYNE1-206ENST00000367253 CHD2O14647 1828 aaKnown RBP8.9□□□□□ -0.99
SYNE1-206ENST00000367253 ASNA1O43681 348 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 VPS4BO75351 444 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms