RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 UBA3Q8TBC4 463 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TFAP2BQ92481 460 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 SMG9Q9H0W8 520 aaKnown RBP16.23■□□□□ 0.19
PRKN-203ENST00000366894 GANQ9H2C0 597 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 SYNCQ9H7C4 482 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TBC1D17Q9HA65 648 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 TRPC7Q9HCX4 862 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 ST7Q9NRC1 585 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 MYH10P35580 1976 aa16.23■□□□□ 0.19
PRKN-203ENST00000366894 STK25O00506 426 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 SLC9A3R1O14745 358 aaPredicted RBP16.22■□□□□ 0.19
PRKN-203ENST00000366894 TEX33O43247 280 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 GPD2P43304 727 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 KPNA1P52294 538 aaPredicted RBP16.22■□□□□ 0.19
PRKN-203ENST00000366894 STARD6P59095 220 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 FCHO2Q0JRZ9 810 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 BTBD8Q5XKL5 378 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 DPY19L2P1Q6NXN4 242 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 VPS36Q86VN1 386 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 TTC30AQ86WT1 665 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 RIN3Q8TB24 985 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
PRKN-203ENST00000366894 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 SECISBP2LQ93073 1101 aaKnown RBP16.22■□□□□ 0.19
PRKN-203ENST00000366894 SHDQ96IW2 340 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 ABCC13Q9NSE7 274 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 STRIP2Q9ULQ0 834 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
PRKN-203ENST00000366894 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 HHLA1C9JL84 531 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 ZNF263O14978 683 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 ZDHHC11BP0C7U3 371 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 TCF3P15923 654 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 GDI1P31150 447 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 JAM2P57087 298 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 SLC7A9P82251 487 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 COG7P83436 770 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 NR1H3Q13133 447 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.19
PRKN-203ENST00000366894 SFMBT2Q5VUG0 894 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 RSRC2Q7L4I2 434 aaKnown RBP16.21■□□□□ 0.19
PRKN-203ENST00000366894 DGLUCYQ7Z3D6 616 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 SLC47A2Q86VL8 602 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 RNF214Q8ND24 703 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 BPIFB1Q8TDL5 484 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 SYN2Q92777 582 aaPredicted RBP16.21■□□□□ 0.19
PRKN-203ENST00000366894 DNASE1L2Q92874 299 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 USP13Q92995 863 aaPredicted RBP16.21■□□□□ 0.19
PRKN-203ENST00000366894 RMDN1Q96DB5 314 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 SLC22A12Q96S37 553 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 FOXQ1Q9C009 403 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 TRPV5Q9NQA5 729 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 DNMT3LQ9UJW3 386 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 NAGPAQ9UK23 515 aa16.21■□□□□ 0.19
PRKN-203ENST00000366894 LUC7L2Q9Y383 392 aaKnown RBP16.21■□□□□ 0.19
PRKN-203ENST00000366894 ITIH6Q6UXX5 1313 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 KIF26AQ9ULI4 1882 aaPredicted RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 TICRRQ7Z2Z1 1910 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 CHADO15335 359 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 GFPT2O94808 682 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 GLI1P08151 1106 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 GLULP15104 373 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 MLLT6P55198 1093 aaPredicted RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 CDR2Q01850 454 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 APBA1Q02410 837 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 PRKCQQ04759 706 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 ZC3H14Q6PJT7 736 aaKnown RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 TMEM110Q86TL2 294 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 C1orf131Q8NDD1 294 aaKnown RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 MSANTD3Q96H12 275 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 PPP1R13BQ96KQ4 1090 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 HEBP1Q9NRV9 189 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 AIPL1Q9NZN9 384 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 DLGAP2Q9P1A6 1054 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 ARHGAP26Q9UNA1 814 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 ZNF510Q9Y2H8 683 aa16.2■□□□□ 0.18
PRKN-203ENST00000366894 MTF2Q9Y483 593 aaPredicted RBP16.2■□□□□ 0.18
PRKN-203ENST00000366894 C2orf78A6NCI8 922 aa16.19■□□□□ 0.18
PRKN-203ENST00000366894 TLR5O60602 858 aa16.19■□□□□ 0.18
PRKN-203ENST00000366894 MBL2P11226 248 aaPredicted RBP16.19■□□□□ 0.18
PRKN-203ENST00000366894 RARGP13631 454 aa16.19■□□□□ 0.18
PRKN-203ENST00000366894 LCP1P13796 627 aa16.19■□□□□ 0.18
PRKN-203ENST00000366894 CD72P21854 359 aa16.19■□□□□ 0.18
PRKN-203ENST00000366894 RPL34P49207 117 aaKnown RBP16.19■□□□□ 0.18
PRKN-203ENST00000366894 KLK7P49862 253 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms