RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
CAPN9-203ENST00000366666 IFI16Q16666 785 aaKnown RBP12.8□□□□□ -0.36
CAPN9-203ENST00000366666 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 SIX6OS1Q8N1H7 587 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 ZNF461Q8TAF7 563 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 RXFP2Q8WXD0 754 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 ALG3Q92685 438 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 CD101Q93033 1021 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 EHD2Q9NZN4 543 aa12.8□□□□□ -0.36
CAPN9-203ENST00000366666 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 C2CD4BA6NLJ0 364 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 SHOX2O60902 331 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 PROSCO94903 275 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 HAPLN1P10915 354 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 ATXN1P54253 815 aaKnown RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 PLPP4Q5VZY2 271 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 GIPC2Q8TF65 315 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 FAM149B1Q96BN6 582 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 DDX3YO15523 660 aaKnown RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 ZBED1O96006 694 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 ATF2P15336 505 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 PDGFRAP16234 1089 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 MAGEA11P43364 429 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 ATP11AP98196 1134 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 CDO1Q16878 200 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 ATP13A4Q4VNC1 1196 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
CAPN9-203ENST00000366666 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 VSTM1Q6UX27 236 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 SPPL2BQ8TCT7 592 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 HES6Q96HZ4 224 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 NAALADL1Q9UQQ1 740 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 USP3Q9Y6I4 520 aa12.79□□□□□ -0.36
CAPN9-203ENST00000366666 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
CAPN9-203ENST00000366666 PSMA2P25787 234 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 RAB33AQ14088 237 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 DEFB106AQ8N104 65 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 AENQ8WTP8 325 aaKnown RBP12.78□□□□□ -0.36
CAPN9-203ENST00000366666 EDEM1Q92611 657 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
CAPN9-203ENST00000366666 MS4A14Q96JA4 679 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 CAPZA3Q96KX2 299 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 C8orf48Q96LL4 319 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 OSER1Q9NX31 292 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 IP6K2Q9UHH9 426 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 PCDHA11Q9Y5I1 949 aa12.78□□□□□ -0.36
CAPN9-203ENST00000366666 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
CAPN9-203ENST00000366666 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 EPOPA6NHQ4 379 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 A6NNZ2 444 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 SPOPO43791 374 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 LRCH4O75427 683 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 GPD1P21695 349 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 IL1R2P27930 398 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 GGCXP38435 758 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 LLGL1Q15334 1064 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 OTUD1Q5VV17 481 aaPredicted RBP12.77□□□□□ -0.36
CAPN9-203ENST00000366666 PM20D1Q6GTS8 502 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 SCD5Q86SK9 330 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.36
CAPN9-203ENST00000366666 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 PLVAPQ9BX97 442 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.36
CAPN9-203ENST00000366666 NMUR1Q9HB89 426 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 CYP4F11Q9HBI6 524 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 RXFP1Q9HBX9 757 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.36
CAPN9-203ENST00000366666 NUDT5Q9UKK9 219 aa12.77□□□□□ -0.36
CAPN9-203ENST00000366666 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 GOLGA8KD6RF30 607 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 AGPSO00116 658 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 TGM5O43548 720 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 CAPN15O75808 1086 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 GJC1P36383 396 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.37
CAPN9-203ENST00000366666 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.37
CAPN9-203ENST00000366666 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
CAPN9-203ENST00000366666 RPS6KA1Q15418 735 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 MRPL43Q8N983 215 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms