RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 SMOQ99835 787 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
LINC00449-201ENST00000366259 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
LINC00449-201ENST00000366259 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 CABIN1Q9Y6J0 2220 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 UBE4BO95155 1302 aa13.12□□□□□ -0.31
LINC00449-201ENST00000366259 A0A1W2PQF6 199 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 GREM1O60565 184 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 CUTAO60888 179 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 C4BPAP04003 597 aaKnown RBP13.11□□□□□ -0.31
LINC00449-201ENST00000366259 HOXB2P14652 356 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 AFMP43652 599 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 FAM193AP78312 1265 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 DLG4P78352 724 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 CUL4BQ13620 913 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 NCOA4Q13772 614 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 BYSLQ13895 437 aaKnown RBP13.11□□□□□ -0.31
LINC00449-201ENST00000366259 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
LINC00449-201ENST00000366259 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
LINC00449-201ENST00000366259 NACA2Q9H009 215 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 SLC6A17Q9H1V8 727 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
LINC00449-201ENST00000366259 OSER1Q9NX31 292 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
LINC00449-201ENST00000366259 IGHV1OR15-9A0A0B4J2B8 117 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 FAM92AA1XBS5 289 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 MDM4O15151 490 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 AP5Z1O43299 807 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 TLR5O60602 858 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 NTSR1P30989 418 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 TUBP50607 506 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 NDST1P52848 882 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SIM1P81133 766 aaPredicted RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 ZNF33AQ06730 810 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SPDYCQ5MJ68 293 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SPOPLQ6IQ16 392 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SLC41A1Q8IVJ1 513 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SLC2A14Q8TDB8 520 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 BHMTQ93088 406 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 TNIP3Q96KP6 325 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 NUDT5Q9UKK9 219 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 KLK13Q9UKR3 277 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 CYP8B1Q9UNU6 501 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 RAD54BQ9Y620 910 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
LINC00449-201ENST00000366259 ACACAQ13085 2346 aa13.1□□□□□ -0.31
LINC00449-201ENST00000366259 PLXNB3Q9ULL4 1909 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 PRRT4C9JH25 899 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 SERPINF2P08697 491 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 TYRP14679 529 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 NDUFV2P19404 249 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 GRAMD4Q6IC98 578 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 SLC36A4Q6YBV0 504 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 TRMT11Q7Z4G4 463 aaKnown RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 JAKMIP2Q96AA8 810 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 P2RY11Q96G91 374 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 ZNF396Q96N95 335 aaPredicted RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
LINC00449-201ENST00000366259 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 COMMD8Q9NX08 183 aa13.09□□□□□ -0.31
LINC00449-201ENST00000366259 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms