RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 DHX36Q9H2U1 1008 aaKnown RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ARMT1Q9H993 441 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MRPL44Q9H9J2 332 aaKnown RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TMEM8AQ9HCN3 771 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TMEM45AQ9NWC5 275 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CDY1Q9Y6F8 540 aa2.2□□□□□ -2.06
RNU6-1048P-201ENST00000364054 WASHC2CQ9Y4E1 1318 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 E2F8A0AVK6 867 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MBD3L4A6NDZ8 208 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MBD3L3A6NE82 208 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 H3BML4 177 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 EXOC5O00471 708 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CD3EAPO15446 510 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CTIFO43310 598 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLC3A2P08195 630 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 U2AF1L5P0DN76 240 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TFEBP19484 476 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PGDP52209 483 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 JAK3P52333 1124 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ARFIP2P53365 341 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 U2AF1Q01081 240 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TIAL1Q01085 375 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CCDC15Q0P6D6 951 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CTBP1Q13363 440 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CLCA4Q14CN2 919 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PRTGQ2VWP7 1150 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GLE1Q53GS7 698 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 EARS2Q5JPH6 523 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ATAT1Q5SQI0 421 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 C9orf50Q5SZB4 431 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 IFIT1BQ5T764 474 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CAPRIN2Q6IMN6 1127 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 GSG1LQ6UXU4 331 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CATIPQ7Z7H3 387 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 YAF2Q8IY57 180 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DCP1BQ8IZD4 617 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZNF548Q8NEK5 533 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DNAJB14Q8TBM8 379 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RAPGEF4Q8WZA2 1011 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 KAT2BQ92831 832 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ATP2A3Q93084 1043 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLC25A28Q96A46 364 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FAM84BQ96KN1 310 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MRGPRX1Q96LB2 322 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HTATIP2Q9BUP3 242 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RNF26Q9BY78 433 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DPH1Q9BZG8 443 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 NUAK2Q9H093 628 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 USP29Q9HBJ7 922 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FZD3Q9NPG1 666 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 NMRK2Q9NPI5 230 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PAPOLBQ9NRJ5 636 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HIF1ANQ9NWT6 349 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 WNT16Q9UBV4 365 aa2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 IPO11Q9UI26 975 aaKnown RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PNMA8BQ9ULN7 279 aaPredicted RBP2.19□□□□□ -2.06
RNU6-1048P-201ENST00000364054 C4orf47A7E2U8 309 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ERVV-2B6SEH9 535 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RASSF9O75901 435 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 VNN1O95497 513 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PLAUP00749 431 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 NGFRP08138 427 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 EN2P19622 333 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CDKN1CP49918 316 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DGKQP52824 942 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 EGR4Q05215 589 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ARHGEF7Q14155 803 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZIK1Q3SY52 487 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZNF585BQ52M93 769 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ZNF628Q5EBL2 1059 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RFX8Q6ZV50 586 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CHPFQ8IZ52 775 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FBXL14Q8N1E6 418 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 IQCF1Q8N6M8 205 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 LPAR1Q92633 364 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PIGKQ92643 395 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CENPIQ92674 756 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CTHRC1Q96CG8 243 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 P2RX7Q99572 595 aaKnown RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ASPSCR1Q9BZE9 553 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RBM38Q9H0Z9 239 aaKnown RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TASP1Q9H6P5 420 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ERVK-5Q9HDB9 667 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HOMER2Q9NSB8 354 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 DDX56Q9NY93 547 aaKnown RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 MDFICQ9P1T7 246 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 RGS17Q9UGC6 210 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 HDAC9Q9UKV0 1011 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FZD4Q9ULV1 537 aa2.18□□□□□ -2.06
RNU6-1048P-201ENST00000364054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ISM1B1AKI9 464 aa2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SPRY2O43597 315 aa2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TLX3O43711 291 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 SLC28A2O43868 658 aa2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 PIAS2O75928 621 aa2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 ALDH2P05091 517 aa2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 FGF3P11487 239 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1048P-201ENST00000364054 TPH1P17752 444 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms