RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TRIM4Q9C037 500 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 MANSC1Q9H8J5 431 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 FKTNO75072 461 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 GLRA2P23416 452 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 KLRC2P26717 231 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 EMC1Q8N766 993 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 C2CD2Q9Y426 696 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 MICAL2O94851 1124 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 SERPIND1P05546 499 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 RBP1P09455 135 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 ALDH18A1P54886 795 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 ADIGQ0VDE8 80 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 FAM110CQ1W6H9 321 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 MTMR14Q8NCE2 650 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 ARL8AQ96BM9 186 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 SENP8Q96LD8 212 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 ILKAPQ9H0C8 392 aaPredicted RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 FAM32AQ9Y421 112 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 SNCAIPQ9Y6H5 919 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 H0Y3Z8 333 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 ADCY6O43306 1168 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 HSD17B3P37058 310 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 ZNF467Q7Z7K2 595 aaPredicted RBP13.9□□□□□ -0.18
LDB3-202ENST00000361373 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 TNIP2Q8NFZ5 429 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 NAF1Q96HR8 494 aaKnown RBP13.9□□□□□ -0.18
LDB3-202ENST00000361373 RMDN2Q96LZ7 410 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 WWOXQ9NZC7 414 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SELENONQ9NZV5 590 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 MEFVO15553 781 aaPredicted RBP13.9□□□□□ -0.18
LDB3-202ENST00000361373 CKBP12277 381 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 DENND1BQ6P3S1 775 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 FBXO36Q8NEA4 188 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 TRPM4Q8TD43 1214 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 GPATCH2LQ9NWQ4 482 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 COL1A2P08123 1366 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SYNCRIPO60506 623 aaKnown RBP13.9□□□□□ -0.18
LDB3-202ENST00000361373 MYL4P12829 197 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 RPL9P32969 192 aaKnown RBP13.9□□□□□ -0.18
LDB3-202ENST00000361373 PRKCIP41743 596 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 PTENP60484 403 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 CNGA2Q16280 664 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 NFIL3Q16649 462 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SLC26A11Q86WA9 606 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 TRIM48Q8IWZ4 208 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 APOL5Q9BWW9 433 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 RBM22Q9NW64 420 aaKnown RBP eCLIP13.9□□□□□ -0.18
LDB3-202ENST00000361373 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 FAM95CA0A1B0GW59 222 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 CCDC149Q6ZUS6 474 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 TMEM161BQ8NDZ6 487 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 SLC2A14Q8TDB8 520 aa13.9□□□□□ -0.18
LDB3-202ENST00000361373 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 CRYBB1P53674 252 aaPredicted RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 FBXW4P57775 412 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MED21Q13503 144 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 STARD3Q14849 445 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 ARHGEF19Q8IW93 802 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MYO1HQ8N1T3 1032 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MSL3Q8N5Y2 521 aaKnown RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 CASKIN2Q8WXE0 1202 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 C18orf25Q96B23 403 aaPredicted RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 GAD1Q99259 594 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 HSD17B14Q9BPX1 270 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 GANQ9H2C0 597 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 EVPLLA8MZ36 301 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 PJA2O43164 708 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 HNRNPRO43390 633 aaKnown RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 KCNK10P57789 538 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 BEX3Q00994 111 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 FAXCQ5TGI0 409 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDB3-202ENST00000361373 ZNF473Q8WTR7 871 aaKnown RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 RBBP8Q99708 897 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 LTFP02788 710 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 PSEN1P49768 467 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MGAT5Q09328 741 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 CDH17Q12864 832 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 TIMM13Q9Y5L4 95 aaPredicted RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 DUSP10Q9Y6W6 482 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms