RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 AGR3Q8TD06 166 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 BAP1Q92560 729 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 KLF6Q99612 283 aaPredicted RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 APOL2Q9BQE5 337 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 UBXN6Q9BZV1 441 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 ST6GALNAC4Q9H4F1 302 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 UXTQ9UBK9 157 aaPredicted RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 PCDHA3Q9Y5H8 950 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 XYLBO75191 536 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PYGMP11217 842 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TUBP50607 506 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TUSC3Q13454 348 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 SLC35G1Q2M3R5 365 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 IRF2BP1Q8IU81 584 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 FBXO25Q8TCJ0 367 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 B4GALT4O60513 344 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 RAMP2O60895 175 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 INHAP05111 366 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SELPP16109 830 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 RHOAP61586 193 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 LRRC6Q86X45 466 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SNX19Q92543 992 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTR9-201ENST00000361367 ESRRBO95718 433 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 CKBP12277 381 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 AMPD1P23109 780 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 MARSP56192 900 aaKnown RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 ZIM3Q96PE6 472 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 TASP1Q9H6P5 420 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 XPNPEP1Q9NQW7 623 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SMIM28A0A1B0GU29 152 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 NOS2P35228 1153 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 VCPP55072 806 aaKnown RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 PRMT2P55345 433 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 GUCY1A3Q02108 690 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 CCL14Q16627 93 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 FIBCD1Q8N539 461 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 ANKRD52Q8NB46 1076 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 TSSK1BQ9BXA7 367 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 MARCH2Q9P0N8 246 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 GSTA4O15217 222 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 YBX3P16989 372 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■□□ 14.9
CTR9-201ENST00000361367 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 NAA25Q14CX7 972 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 MARC1Q5VT66 337 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 RETSATQ6NUM9 610 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 N4BP2L2Q92802 583 aaPredicted RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 FOPNLQ96NB1 174 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 NAT9Q9BTE0 207 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 PABPC3Q9H361 631 aaKnown RBP14.34□□□□□ -0.11
CTR9-201ENST00000361367 ABCC13Q9NSE7 274 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 SLC25A13Q9UJS0 675 aa14.34□□□□□ -0.11
CTR9-201ENST00000361367 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.33□□□□□ -0.11
CTR9-201ENST00000361367 SYF2O95926 243 aaKnown RBP14.33□□□□□ -0.11
CTR9-201ENST00000361367 OR1E1P30953 314 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 HADHAP40939 763 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 RGS4P49798 205 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 MTA1Q13330 715 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 ANGPTL8Q6UXH0 198 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 WNT8BQ93098 351 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 LENG9Q96B70 501 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 WHRNQ9P202 907 aa14.33□□□□□ -0.11
CTR9-201ENST00000361367 ZNF536O15090 1300 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 RFC1P35251 1148 aaPredicted RBP14.33□□□□□ -0.12
CTR9-201ENST00000361367 BRCC3P46736 316 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 PABPC1LQ4VXU2 614 aaKnown RBP14.33□□□□□ -0.12
CTR9-201ENST00000361367 MROH9Q5TGP6 573 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 PNKPQ96T60 521 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 SERPINI1Q99574 410 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 SLC39A10Q9ULF5 831 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 FAM47DPA6NHR8 397 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 CHRM3P20309 590 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 FMO1Q01740 532 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 DDIASQ8IXT1 998 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 DERAQ9Y315 318 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 C10orf71Q711Q0 1435 aa14.33□□□□□ -0.12
CTR9-201ENST00000361367 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms