RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SMAD1Q15797 465 aaKnown RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 PPP1R2P3Q6NXS1 205 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SCYL2Q6P3W7 929 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 GALNT15Q8N3T1 639 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MZB1Q8WU39 189 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 DNAJC1Q96KC8 554 aaKnown RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 SLITRK1Q96PX8 696 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 PAFAH2Q99487 392 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 TMEM120AQ9BXJ8 343 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 PCMTD2Q9NV79 361 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 PSMC3IPQ9P2W1 217 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 USP1O94782 785 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CYP1A1P04798 512 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 BGNP21810 368 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CYP24A1Q07973 514 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 HSF5Q4G112 596 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 C1orf146Q5VVC0 180 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CST9Q5W186 159 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CES4AQ5XG92 561 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 IGDCC3Q8IVU1 814 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SIX5Q8N196 739 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 DNERQ8NFT8 737 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CD99L2Q8TCZ2 262 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MPP4Q96JB8 637 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 NMUR2Q9GZQ4 415 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 APOBEC3GQ9HC16 384 aaKnown RBP9.45□□□□□ -0.9
TOP1-201ENST00000361337 SGK1O00141 431 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CCDC22O60826 627 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 KRT1P04264 644 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 LGALS2P05162 132 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 PDGFRBP09619 1106 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 THPOP40225 353 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 RGS2P41220 211 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 FCGRTP55899 365 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 USP46P62068 366 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SLC34A1Q06495 639 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 IRGCQ6NXR0 463 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 C3orf62Q6ZUJ4 267 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 TREML1Q86YW5 311 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 CTAGE3PQ8IX95 158 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 C4orf19Q8IY42 314 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SLC26A7Q8TE54 656 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SKA1Q96BD8 255 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 FAM167AQ96KS9 214 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 MECRQ9BV79 373 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 ZNF112Q9UJU3 913 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 LRCH1Q9Y2L9 728 aa9.45□□□□□ -0.9
TOP1-201ENST00000361337 PSTPIP1O43586 416 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 FAM155BO75949 473 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 KCNA2P16389 499 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PHKA2P46019 1235 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 NCKAP1LP55160 1127 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 GEMIN4P57678 1058 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 NOMO3P69849 1222 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 LAMTOR4Q0VGL1 99 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PTP4A2Q12974 167 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 SMTNL2Q2TAL5 461 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 CMPK2Q5EBM0 449 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 RABGAP1LQ5R372 815 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 EXD1Q8NHP7 514 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TTC17Q96AE7 1141 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 RBM41Q96IZ5 413 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 FAM111AQ96PZ2 611 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 MRPL4Q9BYD3 311 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 ABHD16BQ9H3Z7 469 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 OCEL1Q9H607 264 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TDRKHQ9Y2W6 561 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 CASQ2O14958 399 aaPredicted RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 PMM2O15305 246 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 HBP1O60381 514 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PDE5AO76074 875 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TJP3O95049 919 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PGM3O95394 542 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 DLDP09622 509 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 MYL2P10916 166 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PAX3P23760 479 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 ARL4CP56559 192 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 MCL1Q07820 350 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 OASLQ15646 514 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 CDHR3Q6ZTQ4 885 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 ARHGAP24Q8N264 748 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TRIML2Q8N7C3 387 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 BANPQ8N9N5 519 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 SMC1BQ8NDV3 1235 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 REPS2Q8NFH8 660 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 NPLOC4Q8TAT6 608 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 GATA6Q92908 595 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms