RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CEP76Q8TAP6 659 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 GTPBP2Q9BX10 602 aaKnown RBP22.35■■□□□ 1.17
CD47-202ENST00000361309 SDCBP2Q9H190 292 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 BLZF1Q9H2G9 400 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 SLC39A2Q9NP94 309 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 KRT82Q9NSB4 513 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 COMMD8Q9NX08 183 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
CD47-202ENST00000361309 SLC6A14Q9UN76 642 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 BAHCC1Q9P281 2608 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 CUTAO60888 179 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 BEST1O76090 585 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 ATXN3P54252 364 aaPredicted RBP22.34■■□□□ 1.17
CD47-202ENST00000361309 GFPT1Q06210 699 aaPredicted RBP22.34■■□□□ 1.17
CD47-202ENST00000361309 BMT2Q1RMZ1 405 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 EGFLAMQ63HQ2 1017 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 ZMIZ2Q8NF64 920 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 ERLEC1Q96DZ1 483 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 SMOQ99835 787 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 DNAJC17Q9NVM6 304 aaKnown RBP22.34■■□□□ 1.17
CD47-202ENST00000361309 STARD13Q9Y3M8 1113 aa22.34■■□□□ 1.17
CD47-202ENST00000361309 IGHV1OR15-9A0A0B4J2B8 117 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 A0A1W2PQF6 199 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 LRRIQ3A6PVS8 624 aaPredicted RBP22.33■■□□□ 1.17
CD47-202ENST00000361309 UPK3BL1B0FP48 263 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 UPK3BL2E5RIL1 263 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 TLR5O60602 858 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 SERPINF2P08697 491 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 CCDC130P13994 396 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 SIM1P81133 766 aaPredicted RBP22.33■■□□□ 1.17
CD47-202ENST00000361309 ZNF33AQ06730 810 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 NCOA4Q13772 614 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 KNOP1Q1ED39 458 aaKnown RBP22.33■■□□□ 1.17
CD47-202ENST00000361309 GRAMD4Q6IC98 578 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 HDDC3Q8N4P3 179 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 PARD3BQ8TEW8 1205 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 ACOX2Q99424 681 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 CAPN10Q9HC96 672 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 NEUROG3Q9Y4Z2 214 aa22.33■■□□□ 1.17
CD47-202ENST00000361309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 NEDD8-MDP1E9PL57 170 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 POLR2DO15514 142 aaKnown RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 GREM1O60565 184 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 VNN1O95497 513 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 TBX18O95935 607 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 C4BPAP04003 597 aaKnown RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 ORC1Q13415 861 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 HTR3DQ70Z44 454 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 SLC2A14Q8TDB8 520 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 ZNF396Q96N95 335 aaPredicted RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 BBS2Q9BXC9 721 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 KLF16Q9BXK1 252 aaPredicted RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 MAGEF1Q9HAY2 307 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 TLR8Q9NR97 1041 aaKnown RBP22.32■■□□□ 1.16
CD47-202ENST00000361309 KLK13Q9UKR3 277 aa22.32■■□□□ 1.16
CD47-202ENST00000361309 SRRM3A6NNA2 597 aaPredicted RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 ZBTB24O43167 697 aaPredicted RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 OPHN1O60890 802 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 YEATS4O95619 227 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 TYRP14679 529 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 NDUFV2P19404 249 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 AP3M2P53677 418 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 MAP3K7CLP57077 242 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 CLDN10P78369 228 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 SDE2Q6IQ49 451 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 TPGS1Q6ZTW0 290 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 RABEPKQ7Z6M1 372 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 SLC41A1Q8IVJ1 513 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 CHPFQ8IZ52 775 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 MINDY1Q8N5J2 469 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 OR2I1PQ8NGU4 316 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 IPO4Q8TEX9 1081 aaKnown RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 ZCCHC14Q8WYQ9 949 aaKnown RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 XPO6Q96QU8 1125 aaKnown RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 FBXO44Q9H4M3 255 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 CSNK1G1Q9HCP0 422 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 CD248Q9HCU0 757 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 CYP8B1Q9UNU6 501 aa22.31■■□□□ 1.16
CD47-202ENST00000361309 ANKRD11Q6UB99 2663 aaPredicted RBP22.31■■□□□ 1.16
CD47-202ENST00000361309 NBEAQ8NFP9 2946 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 PVALEFA0A1B0GWK0 134 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 CACNG3O60359 315 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 ZNF217O75362 1048 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 AFMP43652 599 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 NDST1P52848 882 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 CUL4BQ13620 913 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 TOGARAM2Q6ZUX3 1019 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 FAM49BQ9NUQ9 324 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 HMGXB4Q9UGU5 601 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 MSRB2Q9Y3D2 182 aa22.3■■□□□ 1.16
CD47-202ENST00000361309 PRRT4C9JH25 899 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 ARHGAP33O14559 1287 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 ATP5C1P36542 298 aaKnown RBP22.29■■□□□ 1.16
CD47-202ENST00000361309 FAM193AP78312 1265 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 CRYBG2Q8N1P7 616 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 C12orf29Q8N999 325 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 TRIML1Q8N9V2 468 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 GOLGA5Q8TBA6 731 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 HSPA12BQ96MM6 686 aa22.29■■□□□ 1.16
CD47-202ENST00000361309 GABRG3Q99928 467 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms