RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 ZACNQ401N2 412 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 PEAR1Q5VY43 1037 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 SLC23A3Q6PIS1 610 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 UNQ6494/PRO21346Q6UXR6 183 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 NUDT18Q6ZVK8 323 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 MIB1Q86YT6 1006 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 C12orf29Q8N999 325 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 KIAA0895Q8NCT3 520 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 TMEM174Q8WUU8 243 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 KLF16Q9BXK1 252 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 FBXO44Q9H4M3 255 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 TLR8Q9NR97 1041 aaKnown RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 FAM49BQ9NUQ9 324 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 STARD13Q9Y3M8 1113 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 ATXN2Q99700 1313 aaKnown RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 PLXND1Q9Y4D7 1925 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 A0A1W2PQF6 199 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 AP5Z1O43299 807 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 RPN1P04843 607 aaKnown RBP18.36■□□□□ 0.53
COL9A1-203ENST00000360859 SLFN14P0C7P3 912 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 HOXB2P14652 356 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 NTSR1P30989 418 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 HOXD12P35452 270 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 WASP42768 502 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 GRAMD4Q6IC98 578 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 UNC93AQ86WB7 457 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 CEP57L1Q8IYX8 460 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 DEFB119Q8N690 84 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 KCTD10Q9H3F6 313 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 SERTAD1Q9UHV2 236 aa18.36■□□□□ 0.53
COL9A1-203ENST00000360859 CHD6Q8TD26 2715 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 NEDD8-MDP1E9PL57 170 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 CACNG3O60359 315 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 ASS1P00966 412 aaKnown RBP18.35■□□□□ 0.53
COL9A1-203ENST00000360859 NR3C1P04150 777 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 CFIP05156 583 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
COL9A1-203ENST00000360859 ASPAP45381 313 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 RPL6Q02878 288 aaKnown RBP18.35■□□□□ 0.53
COL9A1-203ENST00000360859 SPOPLQ6IQ16 392 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 SLC36A4Q6YBV0 504 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 SV2AQ7L0J3 742 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 GPRIN1Q7Z2K8 1008 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 TMC2Q8TDI7 906 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 TAF4BQ92750 862 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 PAGE5Q96GU1 130 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 ACOX2Q99424 681 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 BBS2Q9BXC9 721 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
COL9A1-203ENST00000360859 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 FSCN3Q9NQT6 498 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 OSER1Q9NX31 292 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 SCML2Q9UQR0 700 aa18.35■□□□□ 0.53
COL9A1-203ENST00000360859 CYP26A1O43174 497 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 ACTN4O43707 911 aaKnown RBP18.34■□□□□ 0.53
COL9A1-203ENST00000360859 F13A1P00488 732 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 FAM200BP0CF97 657 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 TYRP14679 529 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 ADORA2BP29275 332 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
COL9A1-203ENST00000360859 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 KMT5BQ4FZB7 885 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 TPGS1Q6ZTW0 290 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
COL9A1-203ENST00000360859 SCNM1Q9BWG6 230 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 ADAM33Q9BZ11 813 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 MARK1Q9P0L2 795 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 ZMIZ1Q9ULJ6 1067 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 SLC6A14Q9UN76 642 aa18.34■□□□□ 0.53
COL9A1-203ENST00000360859 MYO18AQ92614 2054 aaKnown RBP18.34■□□□□ 0.53
COL9A1-203ENST00000360859 IGHV1OR15-9A0A0B4J2B8 117 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 PRRT4C9JH25 899 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 HHLA1C9JL84 531 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 PDXKO00764 312 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 IKBKBO14920 756 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 ZNF33AQ06730 810 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 SEMA3BQ13214 749 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 CEP135Q66GS9 1140 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 SDE2Q6IQ49 451 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 KIAA1211LQ6NV74 962 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 CLEC20AQ6ZU45 233 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 TOGARAM2Q6ZUX3 1019 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 CHPFQ8IZ52 775 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 KDF1Q8NAX2 398 aaPredicted RBP18.33■□□□□ 0.52
COL9A1-203ENST00000360859 CEP76Q8TAP6 659 aa18.33■□□□□ 0.52
COL9A1-203ENST00000360859 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms