RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 NPNTQ6UXI9 565 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ANKRD23Q86SG2 305 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 C12orf29Q8N999 325 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 FAM149B1Q96BN6 582 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 L3MBTL3Q96JM7 780 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 HSFY1Q96LI6 401 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 MORF4L1Q9UBU8 362 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 SMIM35A0A1B0GVV1 85 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ENDOD1O94919 500 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 SNRPAP09012 282 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 GNAT1P11488 350 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 CYP2F1P24903 491 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 RIPK1Q13546 671 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 MOGSQ13724 837 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 OLFML1Q6UWY5 402 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 GPR142Q7Z601 462 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ANKRD52Q8NB46 1076 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 MTBPQ96DY7 904 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 APOPT1Q96IL0 206 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 LRRC4Q9HBW1 653 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 STK38LQ9Y2H1 464 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 M0QZ92 97 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 IGF2BP3O00425 579 aaKnown RBP eCLIP9.66□□□□□ -0.868e-8■■■■■ 28.4
GTF3C2-202ENST00000359541 DYNC1LI2O43237 492 aaPredicted RBP9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 MGRN1O60291 552 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 BANF1O75531 89 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 PSMC4P43686 418 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SERPINB9P50453 376 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 NCALDP61601 193 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 PMF1Q6P1K2 205 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC26A9Q7LBE3 791 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 EGFL6Q8IUX8 553 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 AGGF1Q8N302 714 aaeCLIP9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 DENND1AQ8TEH3 1009 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ZNF75CPQ92670 426 aaPredicted RBP9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ERP27Q96DN0 273 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 PEBP4Q96S96 227 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 MANSC1Q9H8J5 431 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 KIF9Q9HAQ2 790 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 GPATCH2LQ9NWQ4 482 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 AP4E1Q9UPM8 1137 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 POLR2AP24928 1970 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 H3BRJ5 948 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 RECQL4O94761 1208 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 LCP1P13796 627 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 RBL1P28749 1068 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 FOXN2P32314 431 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TMEM62Q0P6H9 643 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TMEM63BQ5T3F8 832 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ANKRD20A3Q5VUR7 823 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TCP10LQ8TDR4 215 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 MAML3Q96JK9 1138 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 OSMRQ99650 979 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 KATNAL1Q9BW62 490 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 NRDE2Q9H7Z3 1164 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 NOD2Q9HC29 1040 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ETNK2Q9NVF9 386 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 PRKAG3Q9UGI9 489 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 A0A1W2PPM1 405 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TCRBV9S1A1TA0A576 114 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 WDR91A4D1P6 747 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 HACD1B0YJ81 288 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TYROBPO43914 113 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ATP6V1G2O95670 118 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 GCAP28676 217 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 FDFT1P37268 417 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 KCNJ11Q14654 390 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC45A4Q5BKX6 768 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 GLRA4Q5JXX5 417 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 C9orf57Q5W0N0 161 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC9A4Q6AI14 798 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SIX6OS1Q8N1H7 587 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 CXorf38Q8TB03 319 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC44A1Q8WWI5 657 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ATP2A3Q93084 1043 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TSSK1BQ9BXA7 367 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 TXNDC16Q9P2K2 825 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 ZFP69BQ9UJL9 534 aa9.66□□□□□ -0.86
GTF3C2-202ENST00000359541 KPNA7A9QM74 516 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 UNC5CO95185 931 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 DARSP14868 501 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SMPD1P17405 629 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ARCQ7LC44 396 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 TTC30AQ86WT1 665 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 MCUQ8NE86 351 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PPP1R14CQ8TAE6 165 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC35F5Q8WV83 523 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 TTC17Q96AE7 1141 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms