RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 DYNC1I1O14576 645 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 NOL4O94818 638 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 TOP3BO95985 862 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 USP17L7P0C7H9 530 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CCDC172P0C7W6 258 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 PLA2G4BP0C869 781 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 U2AF2P26368 475 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 ABCD1P33897 745 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 DPP6P42658 865 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 TOB1P50616 345 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CDR1P51861 262 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 SLC12A3P55017 1021 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 RPL10AP62906 217 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 TSPY1Q01534 308 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 POU5F1Q01860 360 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 FAM160A1Q05DH4 1040 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 LMAN2Q12907 356 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 ZNF77Q15935 545 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 NFE2Q16621 373 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 SV2CQ496J9 727 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 WSCD1Q658N2 575 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 NAIF1Q69YI7 327 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CCDC83Q8IWF9 413 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 FAM184AQ8NB25 1140 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 DEFB124Q8NES8 71 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 USP33Q8TEY7 942 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 TRMT2BQ96GJ1 504 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CDK5RAP3Q96JB5 506 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 SPACA7Q96KW9 195 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CNOT6LQ96LI5 555 aaKnown RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 MSTO1Q9BUK6 570 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 SLC32A1Q9H598 525 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 ASB7Q9H672 318 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 DPP3Q9NY33 737 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 EVLQ9UI08 416 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 ODF2LQ9ULJ1 636 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 MAGED2Q9UNF1 606 aaPredicted RBP6.79□□□□□ -1.32
CCDC196-201ENST00000359454 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 INVSQ9Y283 1065 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 C2CD2Q9Y426 696 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 WNT6Q9Y6F9 365 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 CACNA1GO43497 2377 aa6.79□□□□□ -1.32
CCDC196-201ENST00000359454 TSC2P49815 1807 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 FAM208BQ5VWN6 2430 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 NPHP3-ACAD11A0A0J9YXS1 232 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 KPNA7A9QM74 516 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 PATE3B3GLJ2 98 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 J3QW42 95 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 K7ENM7 598 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 SLC26A4O43511 780 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ALDH1A2O94788 518 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 NFATC1O95644 943 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 GHRHP01286 108 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 CKMP06732 381 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 EDN3P14138 238 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 TCF3P15923 654 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 BCKDHBP21953 392 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 DHPSP49366 369 aaPredicted RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 GPR15P49685 360 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 IRX4P78413 519 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 MRPS21P82921 87 aaKnown RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 RABEP1Q15276 862 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ARSHQ5FYA8 562 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ZNF385CQ66K41 422 aaPredicted RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 LMBRD2Q68DH5 695 aaPredicted RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 SLFN12LQ6IEE8 588 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ANO7Q6IWH7 933 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 LPCAT2Q7L5N7 544 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 NT5DC4Q86YG4 428 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 MYCT1Q8N699 235 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 FSIP1Q8NA03 581 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 OLIG1Q8TAK6 271 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 LEO1Q8WVC0 666 aaPredicted RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 PIGKQ92643 395 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ITFG2Q969R8 447 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 MYRFLQ96LU7 910 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 ZNF560Q96MR9 790 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 PLIN2Q99541 437 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 NCAPGQ9BPX3 1015 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 PI4K2AQ9BTU6 479 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 NUSAP1Q9BXS6 441 aaKnown RBP6.78□□□□□ -1.32
CCDC196-201ENST00000359454 TPSD1Q9BZJ3 242 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 PARVGQ9HBI0 331 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 TRPC7Q9HCX4 862 aa6.78□□□□□ -1.32
CCDC196-201ENST00000359454 TMLHEQ9NVH6 421 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms