RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GCOM2Q9BZD3 368 aaPredicted RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 FGFR1OP2Q9NVK5 253 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SLC24A2Q9UI40 661 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 USP18Q9UMW8 372 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SMG5Q9UPR3 1016 aaKnown RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 PRPF4O43172 522 aaKnown RBP eCLIP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 PFKMP08237 780 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 CREB1P16220 341 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 THPOP40225 353 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 LRRC14Q15048 493 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 TAF5Q15542 800 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 ZNF618Q5T7W0 954 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 NUGGCQ68CJ6 796 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SLC27A1Q6PCB7 646 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 TRAF7Q6Q0C0 670 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 TRABD2AQ86V40 505 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SRRM1Q8IYB3 904 aaKnown RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 CYP4X1Q8N118 509 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 CNPY3Q9BT09 278 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 FAM49AQ9H0Q0 323 aaPredicted RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 CXCL16Q9H2A7 254 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SNTG2Q9NY99 539 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 SAE1Q9UBE0 346 aaPredicted RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 PTPRSQ13332 1948 aa14.9□□□□□ -0.02
NIPAL3-203ENST00000358028 GBF1Q92538 1859 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 C2CD4BA6NLJ0 364 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 RASA4BC9J798 803 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 E5RJQ4 531 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 APOC4-APOC2K7ER74 178 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 RASA4O43374 803 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 MGRN1O60291 552 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 APOC2P02655 101 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 CTSHP09668 335 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 TMEM62Q0P6H9 643 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 MPP2Q14168 576 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 GALNTL6Q49A17 601 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 TRNP1Q6NT89 227 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 RGS9BPQ6ZS82 235 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 LRRC8DQ7L1W4 858 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 TMEM199Q8N511 208 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 CCDC63Q8NA47 563 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 RXFP2Q8WXD0 754 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 VWCEQ96DN2 955 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 MRPL45Q9BRJ2 306 aaKnown RBP14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 RSAD1Q9HA92 442 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 PRKAG3Q9UGI9 489 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 TRIP11Q15643 1979 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 MICAL3Q7RTP6 2002 aa14.89□□□□□ -0.03
NIPAL3-203ENST00000358028 FOXO6A8MYZ6 492 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PIK3R2O00459 728 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PPEF2O14830 753 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 GPR32O75388 356 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 ACRP10323 421 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SELPP16109 830 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TSHRP16473 764 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 GDF10P55107 478 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 CDC42EP1Q00587 391 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PDE4CQ08493 712 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 FASTKD3Q14CZ7 662 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TMED2Q15363 201 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 RNF43Q68DV7 783 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PPIL6Q8IXY8 311 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 RSAD2Q8WXG1 361 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 CALN1Q9BXU9 219 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 EIF2AQ9BY44 585 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 C10orf88Q9H8K7 445 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SSU72Q9NP77 194 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TBK1Q9UHD2 729 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PDCD11Q14690 1871 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 DPYSL4O14531 572 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 ATP2C2O75185 946 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 ENDOD1O94919 500 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SETSIPP0DME0 302 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PDGFRAP16234 1089 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 RPL22P35268 128 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 RGS7P49802 495 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 CCDC15Q0P6D6 951 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PDIA2Q13087 525 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PPIGQ13427 754 aaKnown RBP eCLIP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 RIPK1Q13546 671 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 MBTPS1Q14703 1052 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 GPNMBQ14956 572 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 ZBTB6Q15916 424 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 C9orf50Q5SZB4 431 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PPP1R26Q5T8A7 1209 aaPredicted RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TAF2Q6P1X5 1199 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 CYP4V2Q6ZWL3 525 aaPredicted RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms