RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 CCDC60Q8IWA6 550 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 GAL3ST1Q99999 423 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MARCH7Q9H992 704 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ATP13A1Q9HD20 1204 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SPG21Q9NZD8 308 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MAGEA4P43358 317 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ALDH5A1P51649 535 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 GEMIN4P57678 1058 aaKnown RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RBBP4Q09028 425 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ADIGQ0VDE8 80 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RNASE12Q5GAN4 147 aaKnown RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RAD9BQ6WBX8 426 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PER2O15055 1255 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 CTDNEP1O95476 244 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 EFNA5P52803 228 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 IKBKEQ14164 716 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 UAP1L1Q3KQV9 507 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 OTUD3Q5T2D3 398 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 FBXL19Q6PCT2 694 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NDNQ99608 321 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ATG10Q9H0Y0 220 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 DONSONQ9NYP3 566 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RAB23Q9ULC3 237 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NCKAP1Q9Y2A7 1128 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 USP42Q9H9J4 1324 aaKnown RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 GSAPA4D1B5 854 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 KRT33AO76009 404 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TUBP50607 506 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ANTXR2P58335 489 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PFKPQ01813 784 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ADCK1Q86TW2 530 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NAXEQ8NCW5 288 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PSMD13Q9UNM6 376 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PNMA8CA0A1B0GUJ8 204 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MYO1CO00159 1063 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ENPP3O14638 875 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SUPT20HL2P0C7V6 817 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ZFXP17010 805 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RRM1P23921 792 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 HSPA14Q0VDF9 509 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 EFHC1Q5JVL4 640 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SLC51AQ86UW1 340 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ULBP1Q9BZM6 244 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MRPS23Q9Y3D9 190 aaKnown RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 WASF2Q9Y6W5 498 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RNF103O00237 685 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 EXTL3O43909 919 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 HDCP19113 662 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MGAT1P26572 445 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 CYP27C1Q4G0S4 372 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 OVOS1Q6IE37 1185 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SARM1Q6SZW1 724 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PRR23BQ6ZRT6 265 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 KIAA0319LQ8IZA0 1049 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TBC1D19Q8N5T2 526 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TRIM62Q9BVG3 475 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NR2E3Q9Y5X4 410 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ANKARQ7Z5J8 1434 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MGAT4DA6NG13 374 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 OR6A2O95222 327 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MSH3P20585 1137 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 KCNV1Q6PIU1 500 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 P3H2Q8IVL5 708 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ARID3BQ8IVW6 561 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 DEFB106AQ8N104 65 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TEX12Q9BXU0 123 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 MIEF1Q9NQG6 463 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 HAO1Q9UJM8 370 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ANGPTL2Q9UKU9 493 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SYNGAP1Q96PV0 1343 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 B4GALT5O43286 388 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 BANF1O75531 89 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PCSK1P29120 753 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RGS4P49798 205 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 GRB10Q13322 594 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 RCOR2Q8IZ40 523 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 NRBF2Q96F24 287 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PRRG4Q9BZD6 226 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ERBB4Q15303 1308 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 TCOF1Q13428 1488 aaKnown RBP7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PVALEFA0A1B0GWK0 134 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 NR5A2O00482 541 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 CES5AQ6NT32 575 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 KIAA2013Q8IYS2 634 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 ELL3Q9HB65 397 aaPredicted RBP7.57□□□□□ -1.2
VPS13A-202ENST00000357409 AGPAT3Q9NRZ7 376 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 PRMT7Q9NVM4 692 aaPredicted RBP7.57□□□□□ -1.2
VPS13A-202ENST00000357409 AP4E1Q9UPM8 1137 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 ADGRL2O95490 1459 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 IFRD1O00458 451 aaPredicted RBP7.57□□□□□ -1.2
VPS13A-202ENST00000357409 GTF2E2P29084 291 aaKnown RBP7.57□□□□□ -1.2
VPS13A-202ENST00000357409 PIK3CGP48736 1102 aa7.57□□□□□ -1.2
VPS13A-202ENST00000357409 USP39Q53GS9 565 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms