RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ZNHIT6Q9NWK9 470 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-202ENST00000355841 BZW2Q9Y6E2 419 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-202ENST00000355841 ZFP37Q9Y6Q3 630 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-202ENST00000355841 NUMBLQ9Y6R0 609 aa18.75■□□□□ 0.59
PDLIM7-202ENST00000355841 MUC3AQ02505 3323 aa18.75■□□□□ 0.59
PDLIM7-202ENST00000355841 GOLGA8SH3BPF8 625 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 SLC34A2O95436 690 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 LTFP02788 710 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 MMP8P22894 467 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 ZXDBP98169 803 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 BTBD8Q5XKL5 378 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 OLFML1Q6UWY5 402 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 XYLT1Q86Y38 959 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 ZDHHC14Q8IZN3 488 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 SCML4Q8N228 414 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 LRRC3BQ96PB8 259 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 PLA2G2FQ9BZM2 168 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 ANAPC1Q9H1A4 1944 aa18.74■□□□□ 0.59
PDLIM7-202ENST00000355841 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 FYNP06241 537 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 MBL2P11226 248 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 GABRB2P47870 512 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 PTP4A2Q12974 167 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 HTR4Q13639 388 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 ACAD10Q6JQN1 1059 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 RSRC2Q7L4I2 434 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 ARHGAP18Q8N392 663 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 IRGQQ8WZA9 623 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 KCNK12Q9HB15 430 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 TDP1Q9NUW8 608 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 CLIC5Q9NZA1 410 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 ADAM22Q9P0K1 906 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 NAALADL1Q9UQQ1 740 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 DENND4CQ5VZ89 1909 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 A0A087X0T9 212 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 ANHXE9PGG2 379 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 OLFM2O95897 454 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 FAM228BP0C875 321 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 RALAP11233 206 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 PSEN1P49768 467 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 TUBP50607 506 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 RNASE9P60153 205 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 EFEMP1Q12805 493 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 MON1BQ7L1V2 547 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 PHF13Q86YI8 300 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 MIB1Q86YT6 1006 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 GJD3Q8N144 294 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 ZFP14Q9HCL3 533 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 CPQQ9Y646 472 aa18.73■□□□□ 0.59
PDLIM7-202ENST00000355841 GJB6O95452 261 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 FTLP02792 175 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 NCAM1P13591 858 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 SNX16P57768 344 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 SLC6A3Q01959 620 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 GFPT1Q06210 699 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 GRM2Q14416 872 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 FAM102AQ5T9C2 384 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 SYPL2Q5VXT5 272 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 GOLGA1Q92805 767 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 KHSRPQ92945 711 aaKnown RBP eCLIP18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 ABCC13Q9NSE7 274 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 SFMBT1Q9UHJ3 866 aa18.72■□□□□ 0.59
PDLIM7-202ENST00000355841 HEPACAM2A8MVW5 462 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 ATP5C1P36542 298 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 YWHAZP63104 245 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 SLC7A9P82251 487 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 VITQ6UXI7 678 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 TOGARAM2Q6ZUX3 1019 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 VPS36Q86VN1 386 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 MCOLN2Q8IZK6 566 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 SH3RF2Q8TEC5 729 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 ZFRQ96KR1 1074 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 UHRF1Q96T88 793 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 DEF6Q9H4E7 631 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 NHEJ1Q9H9Q4 299 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 TRPV4Q9HBA0 871 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 ZMYM5Q9UJ78 669 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 TRIOO75962 3097 aa18.71■□□□□ 0.59
PDLIM7-202ENST00000355841 SOBPA7XYQ1 873 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 DPYSL4O14531 572 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 ATMINO43313 823 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 HMBSP08397 361 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 IRF1P10914 325 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 MRE11P49959 708 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 ADAM32Q8TC27 787 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 WBP2Q969T9 261 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 POPDC2Q9HBU9 364 aa18.7■□□□□ 0.58
PDLIM7-202ENST00000355841 SPTLC3Q9NUV7 552 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms