RNA–Protein interactions for RNA: ENST00000354480.2

RBM3-201, Transcript of RNA binding motif protein 3, humanhuman

TSL 2 BASIC

Gene RBM3, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-201ENST00000354480 PM20D1Q6GTS8 502 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
RBM3-201ENST00000354480 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 P3H4Q92791 437 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 SLC9A7Q96T83 725 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
RBM3-201ENST00000354480 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 RCOR3Q9P2K3 495 aaPredicted RBP13.21□□□□□ -0.29
RBM3-201ENST00000354480 ADAM28Q9UKQ2 775 aa13.21□□□□□ -0.29
RBM3-201ENST00000354480 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.29
RBM3-201ENST00000354480 H3BQF6 201 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 NRP1O14786 923 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 APOL1O14791 398 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 F9P00740 461 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 LTFP02788 710 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 KLRC2P26717 231 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 PMS2P54278 862 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 DEUP1Q05D60 604 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 TRIM60Q495X7 471 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 FBXO46Q6PJ61 603 aaPredicted RBP13.21□□□□□ -0.3
RBM3-201ENST00000354480 BEND5Q7L4P6 421 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 UBLCP1Q8WVY7 318 aaPredicted RBP13.21□□□□□ -0.3
RBM3-201ENST00000354480 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 HAUS1Q96CS2 278 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 FAF2Q96CS3 445 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.3
RBM3-201ENST00000354480 ZIM3Q96PE6 472 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 TXLNGYQ9BZA5 131 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.3
RBM3-201ENST00000354480 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 H7C4K7 107 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 M0QYT0 321 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 AGPSO00116 658 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 SGK1O00141 431 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 B4GALT3O60512 393 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 IVDP26440 423 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 L1CAMP32004 1257 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 CCL23P55773 120 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 EIF3BP55884 814 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 IKBKEQ14164 716 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 RAB6CQ53S08 254 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 BNIPLQ7Z465 357 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 NDRG1Q92597 394 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 PGAP3Q96FM1 320 aaPredicted RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 SCLYQ96I15 445 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 RAB6CQ9H0N0 254 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 DHX35Q9H5Z1 703 aaKnown RBP13.2□□□□□ -0.3
RBM3-201ENST00000354480 TMLHEQ9NVH6 421 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
RBM3-201ENST00000354480 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■■ 27.2
RBM3-201ENST00000354480 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 F8W810 466 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 RARGP13631 454 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 GRIK1P39086 918 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 ARL4AP40617 200 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 ITGA8P53708 1063 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 BCAR1P56945 870 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 TRIP13Q15645 432 aaPredicted RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 CNKSR3Q6P9H4 555 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 CRIPAKQ8N1N5 446 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 LRRC43Q8N309 656 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 GPATCH2LQ9NWQ4 482 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 USP3Q9Y6I4 520 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
RBM3-201ENST00000354480 YJEFN3A6XGL0 299 aa13.19□□□□□ -0.3
RBM3-201ENST00000354480 E7ENQ6 273 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms