RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 CFAP69A5D8W1 941 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 TM9SF1O15321 606 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 SETDB1Q15047 1291 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 ASRGL1Q7L266 308 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 OTOAQ7RTW8 1153 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 GPR142Q7Z601 462 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 ERP27Q96DN0 273 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 NXF3Q9H4D5 531 aaKnown RBP22.65■■□□□ 1.22
SHMT1-202ENST00000352886 ARHGEF3Q9NR81 526 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 IQANK1A0A1B0GTG1 560 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 ADCY6O43306 1168 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 GPR32O75388 356 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 MT-ND3P03897 115 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 SNX16P57768 344 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 YWHAZP63104 245 aaKnown RBP22.65■■□□□ 1.22
SHMT1-202ENST00000352886 C9orf57Q5W0N0 161 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 NOTUMQ6P988 496 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 CEP57Q86XR8 500 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 ZDHHC17Q8IUH5 632 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 MAGEC3Q8TD91 643 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 SLC44A1Q8WWI5 657 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 CFAP36Q96G28 342 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 MS4A4AQ96JQ5 239 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 APOL6Q9BWW8 343 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 GJD2Q9UKL4 321 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 CHKBQ9Y259 395 aa22.65■■□□□ 1.22
SHMT1-202ENST00000352886 CCL15-CCL14A0A0B4J2E2 113 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 BCLAF3A2AJT9 711 aaKnown RBP22.64■■□□□ 1.21
SHMT1-202ENST00000352886 INHBAP08476 426 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 CCNB1P14635 433 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 CCL15Q16663 113 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 UNC93AQ86WB7 457 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 STK32AQ8WU08 396 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 LRRC37BQ96QE4 947 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 TRIM6Q9C030 488 aaPredicted RBP22.64■■□□□ 1.21
SHMT1-202ENST00000352886 KLC2Q9H0B6 622 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 ETNK2Q9NVF9 386 aa22.64■■□□□ 1.21
SHMT1-202ENST00000352886 PDCD11Q14690 1871 aaKnown RBP22.64■■□□□ 1.21
SHMT1-202ENST00000352886 SPAG6O75602 509 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 RECQL4O94761 1208 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 UNC5CO95185 931 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 APRTP07741 180 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 KRT16P08779 473 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 PDGFRBP09619 1106 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 CCDC130P13994 396 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 ADORA2BP29275 332 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 ATXN1P54253 815 aaKnown RBP22.63■■□□□ 1.21
SHMT1-202ENST00000352886 ARHGAP17Q68EM7 881 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 VSIG1Q86XK7 387 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 CCDC110Q8TBZ0 833 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 C10orf82Q8WW14 230 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 ABHD16BQ9H3Z7 469 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 NRDE2Q9H7Z3 1164 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 RRN3P2A6NIE6 340 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 YBX3P16989 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
SHMT1-202ENST00000352886 AKAP5P24588 427 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 CYP2F1P24903 491 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 SKIV2L2P42285 1042 aaKnown RBP22.63■■□□□ 1.21
SHMT1-202ENST00000352886 FAAP100Q0VG06 881 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 RIPK1Q13546 671 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 PRPF39Q86UA1 669 aaKnown RBP22.63■■□□□ 1.21
SHMT1-202ENST00000352886 ZNF276Q8N554 614 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 SERAC1Q96JX3 654 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 TINF2Q9BSI4 451 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 MORF4L1Q9UBU8 362 aa22.63■■□□□ 1.21
SHMT1-202ENST00000352886 LPXNO60711 386 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 GRB14Q14449 540 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 ALKAL1Q6UXT8 129 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 NCAPGQ9BPX3 1015 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 DHX35Q9H5Z1 703 aaKnown RBP22.62■■□□□ 1.21
SHMT1-202ENST00000352886 ETNK1Q9HBU6 452 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 CNTN3Q9P232 1028 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 CHRM1P11229 460 aaPredicted RBP22.62■■□□□ 1.21
SHMT1-202ENST00000352886 LCP1P13796 627 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 ALDH3A1P30838 453 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 SLC8A1P32418 973 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 BST2Q10589 180 aaKnown RBP22.62■■□□□ 1.21
SHMT1-202ENST00000352886 FRMD8Q9BZ67 464 aaPredicted RBP22.62■■□□□ 1.21
SHMT1-202ENST00000352886 MAGEB5Q9BZ81 275 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 CYLDQ9NQC7 956 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 STK38LQ9Y2H1 464 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 SLC45A1Q9Y2W3 748 aa22.62■■□□□ 1.21
SHMT1-202ENST00000352886 A6NJR5 290 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 DCTN3O75935 186 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 L1CAMP32004 1257 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 PTPN9P43378 593 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 DPYSL2Q16555 572 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 FBXO47Q5MNV8 452 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 SLC26A9Q7LBE3 791 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 CAND1Q86VP6 1230 aaKnown RBP22.61■■□□□ 1.21
SHMT1-202ENST00000352886 KBTBD7Q8WVZ9 684 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 BRI3BPQ8WY22 251 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 VPS11Q9H270 941 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 SPON1Q9HCB6 807 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 NPHS2Q9NP85 383 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 TTLL3Q9Y4R7 772 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 LMO2P25791 158 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 BCAT1P54687 386 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 GBE1Q04446 702 aa22.61■■□□□ 1.21
SHMT1-202ENST00000352886 E2F5Q15329 346 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms