RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TRIM11Q96F44 468 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 PCDHB18PQ96TA0 734 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 THAP2Q9H0W7 228 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 CARD9Q9H257 536 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 PLEKHA4Q9H4M7 779 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 VIPAS39Q9H9C1 493 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 PDE11AQ9HCR9 933 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 TAS2R14Q9NYV8 317 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 UVRAGQ9P2Y5 699 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 CPSF3Q9UKF6 684 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 PCDHB2Q9Y5E7 798 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 PTPRJQ12913 1337 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 F8W810 466 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 CCDC188H7C350 402 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 PGRMC1O00264 195 aaKnown RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 DDX3YO15523 660 aaKnown RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 MEFVO15553 781 aaPredicted RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 CYP26A1O43174 497 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 BUB1BO60566 1050 aaPredicted RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 SASH3O75995 380 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 IL18RAPO95256 599 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 VTNP04004 478 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 SOD2P04179 222 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 MYBL1P10243 752 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 CXCR5P32302 372 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 MATR3P43243 847 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD44-205ENST00000352818 ACOT2P49753 483 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 NNTQ13423 1086 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 BIRC3Q13489 604 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 CUL2Q13617 745 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 GRM2Q14416 872 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 KYAT1Q16773 422 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 UAP1L1Q3KQV9 507 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 ATF7IP2Q5U623 682 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 EFCAB12Q6NXP0 572 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 C8orf74Q6P047 294 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 PKN3Q6P5Z2 889 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 SLC47A2Q86VL8 602 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 LRRC71Q8N4P6 559 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 METTL13Q8N6R0 699 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD44-205ENST00000352818 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 HERC2P3Q9BVR0 1158 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 IMPG2Q9BZV3 1241 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 ACBD3Q9H3P7 528 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 APOBEC3GQ9HC16 384 aaKnown RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 AVENQ9NQS1 362 aaPredicted RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 SEPT11Q9NVA2 429 aaKnown RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 PRMT7Q9NVM4 692 aaPredicted RBP8.68□□□□□ -1.02
CD44-205ENST00000352818 HCFC1R1Q9NWW0 138 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 STIM2Q9P246 746 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 TNFSF13BQ9Y275 285 aa8.68□□□□□ -1.02
CD44-205ENST00000352818 FBN2P35556 2912 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ARNTLO00327 626 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 KCNK3O14649 394 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 DCLK1O15075 740 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ASS1P00966 412 aaKnown RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 MMEP08473 750 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 SRGAP2CP0DJJ0 459 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 MCF2P10911 925 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 UNGP13051 313 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 FGFR4P22455 802 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 CTNNA2P26232 953 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 USP8P40818 1118 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 CLCN3P51790 818 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ZNF132P52740 706 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 NOP14P78316 857 aaKnown RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 IRX4P78413 519 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 CENPCQ03188 943 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 KCNC4Q03721 635 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 GABPB1Q06547 395 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 NCOA4Q13772 614 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 PPP2R5EQ16537 467 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 NOMO2Q5JPE7 1267 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ACAD10Q6JQN1 1059 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 DNAAF5Q86Y56 855 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 RHPN2Q8IUC4 686 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 AENQ8WTP8 325 aaKnown RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 ING5Q8WYH8 240 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 MS4A14Q96JA4 679 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 PSMB7Q99436 277 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 NAP1L3Q99457 506 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 NOTCH4Q99466 2003 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 CDT1Q9H211 546 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 FAM124BQ9H5Z6 455 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 PRORYQ9H606 182 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 ZNF334Q9HCZ1 680 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 OSGEPQ9NPF4 335 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 POLR3BQ9NW08 1133 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 EHD2Q9NZN4 543 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 CTTNBP2NLQ9P2B4 639 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 PACSIN2Q9UNF0 486 aaPredicted RBP8.67□□□□□ -1.02
CD44-205ENST00000352818 PIAS3Q9Y6X2 628 aa8.67□□□□□ -1.02
CD44-205ENST00000352818 COL6A6A6NMZ7 2263 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 EVPLQ92817 2033 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 PLXNB3Q9ULL4 1909 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms