RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CDK18Q07002 472 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 FAXCQ5TGI0 409 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 FAM183BPQ6ZVS7 135 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 TREML1Q86YW5 311 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 EXOC8Q8IYI6 725 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 ARHGAP24Q8N264 748 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 ARMC2Q8NEN0 867 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 E2F7Q96AV8 911 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 INO80BQ9C086 356 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-202ENST00000352393 VRTNQ9H8Y1 702 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 ETNK2Q9NVF9 386 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 BCLAF3A2AJT9 711 aaKnown RBP25.46■■□□□ 1.67
CPNE1-202ENST00000352393 MAGEC1O60732 1142 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 GSTA2P09210 222 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 CYP3A5P20815 502 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 RBL1P28749 1068 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 MBTD1Q05BQ5 628 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 KRT81Q14533 505 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 PDK2Q15119 407 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 LY6KQ17RY6 165 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 ATG16L1Q676U5 607 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 APLFQ8IW19 511 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-202ENST00000352393 UBA3Q8TBC4 463 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 ZNF668Q96K58 619 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-202ENST00000352393 NLRP4Q96MN2 994 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 KLC2Q9H0B6 622 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 ZBED1O96006 694 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 APOEP02649 317 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 GJB1P08034 283 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 CSH1P0DML2 217 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 CSH2P0DML3 217 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 PGM1P36871 562 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 TMPRSS15P98073 1019 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 LGSNQ5TDP6 509 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 SLC9A4Q6AI14 798 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 SCG3Q8WXD2 468 aaKnown RBP25.46■■□□□ 1.67
CPNE1-202ENST00000352393 STMN2Q93045 179 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 LRRC39Q96DD0 335 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 GPR20Q99678 358 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 PTPRFP10586 1907 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 ZSWIM8A7E2V4 1837 aa25.46■■□□□ 1.67
CPNE1-202ENST00000352393 SLC15A5A6NIM6 579 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 LACTBL1A8MY62 500 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 APOL1O14791 398 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 UGT1A9O60656 530 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 MAGEA3P43357 314 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 BMPR2Q13873 1038 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 TMEM132AQ24JP5 1023 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 JADE1Q6IE81 842 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 MAP7D3Q8IWC1 876 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 PDCD7Q8N8D1 485 aaKnown RBP25.45■■□□□ 1.66
CPNE1-202ENST00000352393 MCUQ8NE86 351 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 RAB3IL1Q8TBN0 382 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 USP6NLQ92738 828 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 KLRG1Q96E93 195 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 SYT15Q9BQS2 421 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 WWP1Q9H0M0 922 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 MINDY3Q9H8M7 445 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 UGT1A7Q9HAW7 530 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 UGT1A10Q9HAW8 530 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 UGT1A8Q9HAW9 530 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 GPR25O00155 361 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 DPYSL4O14531 572 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 NPTXRO95502 500 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 ATICP31939 592 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 CPA2P48052 419 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 AP1B1Q10567 949 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 CHI3L2Q15782 390 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 CDO1Q16878 200 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 LBX2Q6XYB7 198 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 UNC5AQ6ZN44 842 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 ARID3BQ8IVW6 561 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-202ENST00000352393 CCDC110Q8TBZ0 833 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 MTBPQ96DY7 904 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 YIPF3Q9GZM5 350 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 PCDH18Q9HCL0 1135 aa25.45■■□□□ 1.66
CPNE1-202ENST00000352393 ARIH2O95376 493 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 BCAR1P56945 870 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 MAP1SQ66K74 1059 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-202ENST00000352393 NAIF1Q69YI7 327 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-202ENST00000352393 OR6B2Q6IFH4 312 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF534Q76KX8 674 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 TMPRSS6Q8IU80 811 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 PCDH19Q8TAB3 1148 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 TEKT4Q8WW24 435 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 HEXIM2Q96MH2 286 aaKnown RBP25.44■■□□□ 1.66
CPNE1-202ENST00000352393 ACAP3Q96P50 834 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 GPATCH2LQ9NWQ4 482 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF212Q9UDV6 495 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 PLA2G4CQ9UP65 541 aa25.44■■□□□ 1.66
CPNE1-202ENST00000352393 CCDC195A0A1B0GUA6 201 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 B2RBV5 119 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 H3BRJ5 948 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 PIK3R2O00459 728 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 SNNO75324 88 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 KRT38O76015 456 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 UPP2O95045 317 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 APRTP07741 180 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 CHRM1P11229 460 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 INCA1Q0VD86 236 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms