RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 NAP1L3Q99457 506 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 TRIM8Q9BZR9 551 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 DDX28Q9NUL7 540 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 SLAMF8Q9P0V8 285 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 PPP2R3BQ9Y5P8 575 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ARHGEF28Q8N1W1 1705 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 ADAMTS3O15072 1205 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SHOX2O60902 331 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 SYF2O95926 243 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 ENTPD1P49961 510 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GNAQP50148 359 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 RAB7AP51149 207 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 KCNQ1P51787 676 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TMEM62Q0P6H9 643 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ST3GAL1Q11201 340 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ABRQ12979 859 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 BTBD16Q32M84 506 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CNPY1Q3B7I2 92 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MSS51Q4VC12 460 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 LRIG3Q6UXM1 1119 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MMGT1Q8N4V1 131 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 RNF10Q8N5U6 811 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 FAM160A2Q8N612 972 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 PPFIBP2Q8ND30 876 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 EXD1Q8NHP7 514 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 DDX1Q92499 740 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 URM1Q9BTM9 101 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 TPPP3Q9BW30 176 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MRPL9Q9BYD2 267 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 KANSL2Q9H9L4 492 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ENAMQ9NRM1 1142 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MTRF1LQ9UGC7 380 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 GPR89AB7ZAQ6 455 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 KIF28PB7ZC32 967 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 E7ENX8 843 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 QSOX1O00391 747 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TXNL1O43396 289 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SMIM24O75264 130 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 PRKD3O94806 890 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FAM107AO95990 144 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GPR89BP0CG08 455 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 EPB41P11171 864 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 MDH1P40925 334 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 TAP2Q03519 686 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GAD2Q05329 585 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MYBPC2Q14324 1141 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GJC2Q5T442 439 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 TMEM268Q5VZI3 342 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 KCTD16Q68DU8 428 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TMEM92Q6UXU6 159 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SV2AQ7L0J3 742 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CCDC84Q86UT8 332 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 DNAAF5Q86Y56 855 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 MAGEC3Q8TD91 643 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ATG4CQ96DT6 458 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SPDL1Q96EA4 605 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CMTM3Q96MX0 182 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ANKRD27Q96NW4 1050 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TSC22D3Q99576 134 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CLPBQ9H078 707 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 JMJD4Q9H9V9 463 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 RXFP1Q9HBX9 757 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GPRC5BQ9NZH0 403 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SAE1Q9UBE0 346 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 ZNRF3Q9ULT6 936 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 UTP11Q9Y3A2 253 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 SOWAHBA6NEL2 793 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 GPR39O43194 453 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 IL18RAPO95256 599 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 MT-ATP6P00846 226 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 DNTTP04053 509 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 CALM1P0DP23 149 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 CALM2P0DP24 149 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 CALM3P0DP25 149 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 HSPD1P10809 573 aaKnown RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 NME1P15531 152 aaKnown RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 SCP2P22307 547 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 PPM1AP35813 382 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 MAGEA1P43355 309 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 EIF3BP55884 814 aaKnown RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 EIF4A1P60842 406 aaKnown RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 DLG4P78352 724 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 GALNT2Q10471 571 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 DCAF17Q5H9S7 520 aaPredicted RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 C16orf87Q6PH81 154 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 MFSD6Q6ZSS7 791 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 TRAPPC11Q7Z392 1133 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 CDAN1Q8IWY9 1227 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 KIAA1143Q96AT1 154 aaPredicted RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 MSI2Q96DH6 328 aaKnown RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 RNF125Q96EQ8 232 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 TBATAQ96M53 351 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 ADPGKQ9BRR6 497 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 TMUB1Q9BVT8 246 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 C16orf96A6NNT2 1141 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 RASA4BC9J798 803 aa6.19□□□□□ -1.42
RFC1-201ENST00000349703 F8W031 263 aaPredicted RBP6.19□□□□□ -1.42
RFC1-201ENST00000349703 MYO1FO00160 1098 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms