RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CCDC15Q0P6D6 951 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 BNIP1Q12981 228 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 SH2D4BQ5SQS7 431 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 WASHC2DQ5SRD0 308 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 LCNL1Q6ZST4 164 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 UBE2R2Q712K3 238 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 SMIM5Q71RC9 77 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 CYB5R4Q7L1T6 521 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 LRRC34Q8IZ02 419 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 TMTC2Q8N394 836 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 TTLL6Q8N841 843 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ZNF526Q8TF50 670 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ATXN2LQ8WWM7 1075 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 CELF1Q92879 486 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ZBTB8AQ96BR9 441 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 EPSTI1Q96J88 318 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 TMEM209Q96SK2 561 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ELAC2Q9BQ52 826 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 YIPF4Q9BSR8 244 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 BOCQ9BWV1 1114 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 RNPEPL1Q9HAU8 725 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 MAGEF1Q9HAY2 307 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 LY9Q9HBG7 655 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 AGPAT5Q9NUQ2 364 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 LARSQ9P2J5 1176 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 PDP2Q9P2J9 529 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ARL2BPQ9Y2Y0 163 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 GMEB1Q9Y692 573 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ZNF839A8K0R7 811 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 BTNL10A8MVZ5 291 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ENO2P09104 434 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 NUDT17P0C025 328 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 SP100P23497 879 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 CCNE1P24864 410 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 PHKA1P46020 1223 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TRAPPC10P48553 1259 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 GNAQP50148 359 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 PEX5P50542 639 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ATP2C1P98194 919 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ALX1Q15699 326 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 NAB2Q15742 525 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 SLC15A2Q16348 729 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 C10orf76Q5T2E6 689 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TCERG1LQ5VWI1 586 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 CPZQ66K79 652 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TMEM154Q6P9G4 183 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 BTNL9Q6UXG8 535 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TAOK1Q7L7X3 1001 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 C2CD5Q86YS7 1000 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ZSCAN18Q8TBC5 510 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 ACTRT1Q8TDG2 376 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 IGDCC4Q8TDY8 1250 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 SYN2Q92777 582 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 PPP1R14BQ96C90 147 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 OPTNQ96CV9 577 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 TMEM109Q9BVC6 243 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 DLL4Q9NR61 685 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 KCNH7Q9NS40 1196 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 SMARCAL1Q9NZC9 954 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
UBE2D3-204ENST00000349311 MROH7Q68CQ1 1323 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 ZSCAN5CA6NGD5 496 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 PGRMC1O00264 195 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 FOXP2O15409 715 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 GPAA1O43292 621 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 SNX3O60493 162 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 KRT16P08779 473 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 COL6A1P12109 1028 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 CCNB1P14635 433 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 DESP17661 470 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 RPL13P26373 211 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 AOAHP28039 575 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 CASP1P29466 404 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 ECHS1P30084 290 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 ADD2P35612 726 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 LONP1P36776 959 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 STAT6P42226 847 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 RAD23BP54727 409 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 POLE2P56282 527 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 DSG1Q02413 1049 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 PCBP1Q15365 356 aaKnown RBP eCLIP8.15□□□□□ -1.19e-7■□□□□ 10.8
UBE2D3-204ENST00000349311 RPS6KA1Q15418 735 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 CLUL1Q15846 466 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 SEPT7Q16181 437 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 CCDC178Q5BJE1 867 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 C1QTNF12Q5T7M4 302 aa8.15□□□□□ -1.1
UBE2D3-204ENST00000349311 TRIM68Q6AZZ1 485 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms