RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C7orf26Q96N11 449 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 C20orf27Q9GZN8 174 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-202ENST00000348987 SUDS3Q9H7L9 328 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-202ENST00000348987 C17orf75Q9HAS0 396 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PIM2Q9P1W9 311 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 IVNS1ABPQ9Y6Y0 642 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 RAG1P15918 1043 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 CHI3L2Q15782 390 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 KBTBD12Q3ZCT8 623 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 MTERF2Q49AM1 385 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 LIN9Q5TKA1 542 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 TXNRD3NBQ6F5E7 133 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 IGDCC3Q8IVU1 814 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 EFCAB3Q8N7B9 438 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 E2F7Q96AV8 911 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 ARHGAP28Q9P2N2 729 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 NFKBIEO00221 500 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 FAM155BO75949 473 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 INHBAP08476 426 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 RPL7AP62424 266 aaKnown RBP19.36■□□□□ 0.69
SCARF1-202ENST00000348987 XIAPP98170 497 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 PRKG1Q13976 671 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 MYLK3Q32MK0 819 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 ZACNQ401N2 412 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 PAOXQ6QHF9 649 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 TMEM270Q6UE05 265 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 NAT8LQ8N9F0 302 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 CYP26B1Q9NR63 512 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 UBAP1Q9NZ09 502 aa19.36■□□□□ 0.69
SCARF1-202ENST00000348987 BTBD19C9JJ37 291 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 ITGAVP06756 1048 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 SERPINA6P08185 405 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 ACO1P21399 889 aaKnown RBP19.35■□□□□ 0.69
SCARF1-202ENST00000348987 PMLP29590 882 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 SULT2A1Q06520 285 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 RABGAP1LQ5R372 815 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 SPOCD1Q6ZMY3 1216 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 MICALL2Q8IY33 904 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 SHCBP1LQ9BZQ2 653 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 CYP4F11Q9HBI6 524 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 MRPL47Q9HD33 250 aaKnown RBP19.35■□□□□ 0.69
SCARF1-202ENST00000348987 TMEM63AO94886 807 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 C4BPAP04003 597 aaKnown RBP19.35■□□□□ 0.69
SCARF1-202ENST00000348987 LIG4P49917 911 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 DYNLT1P63172 113 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 PLOD1Q02809 727 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-202ENST00000348987 PCGF5Q86SE9 256 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 ZNF554Q86TJ5 538 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 RBM38Q9H0Z9 239 aaKnown RBP19.35■□□□□ 0.69
SCARF1-202ENST00000348987 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 INPP5FQ9Y2H2 1132 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 PPME1Q9Y570 386 aa19.35■□□□□ 0.69
SCARF1-202ENST00000348987 DOCK5Q9H7D0 1870 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 MYOCOSA0A1B0GUC4 107 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 TCRBV9S1A1TA0A576 114 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 NDC80O14777 642 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 DGAT1O75907 488 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 EDN1P05305 212 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 GARTP22102 1010 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 GMPSP49915 693 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 CBX3Q13185 183 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SH3D19Q5HYK7 790 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 TCHHL1Q5QJ38 904 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SNRNP48Q6IEG0 339 aaKnown RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 USP37Q86T82 979 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SLC13A1Q9BZW2 595 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 BTBD7Q9P203 1132 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 STRNO43815 780 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SUPT3HO75486 399 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 PROCP04070 461 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 CCND2P30279 289 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 ABCD1P33897 745 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 FDFT1P37268 417 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 BAG6P46379 1132 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 ACTR2P61160 394 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SP2Q02086 613 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 BTKQ06187 659 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 DCTN2Q13561 401 aaKnown RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SYCP2LQ5T4T6 812 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 ATG16L1Q676U5 607 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 CRLF3Q8IUI8 442 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 SLC44A1Q8WWI5 657 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 PRPF31Q8WWY3 499 aaKnown RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 IRGQQ8WZA9 623 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 ATP6V0A1Q93050 837 aa19.34■□□□□ 0.69
SCARF1-202ENST00000348987 NKD2Q969F2 451 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 JPH1Q9HDC5 661 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-202ENST00000348987 EXTL3O43909 919 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 CCNT2O60583 730 aaKnown RBP19.33■□□□□ 0.69
SCARF1-202ENST00000348987 TBCCQ15814 346 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 DENND5BQ6ZUT9 1274 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 PDIK1LQ8N165 341 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 OR5B17Q8NGF7 314 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 HSPBAP1Q96EW2 488 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 BTBD9Q96Q07 612 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 TIMMDC1Q9NPL8 285 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 XPO7Q9UIA9 1087 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms