RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HLA-DPA1P20036 260 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PSMA4P25789 261 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC1A1P43005 524 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 HMBOX1Q6NT76 420 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 EFHBQ8N7U6 833 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PPHLN1Q8NEY8 458 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 OTULINQ96BN8 352 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC7A5P2Q9GIP4 190 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ISCUQ9H1K1 167 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PRG3Q9Y2Y8 225 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 DIP2AQ14689 1571 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PSMD11O00231 422 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 EEF2KO00418 725 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC25A27O95847 323 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 S100A6P06703 90 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ACTR2P61160 394 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PSMC6P62333 389 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 DEPDC1Q5TB30 811 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ATPAF2Q8N5M1 289 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 RSPH9Q9H1X1 276 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ZNF304Q9HCX3 659 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 KCND1Q9NSA2 647 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 CCDC182A6NF36 153 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 FYNP06241 537 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 SRGNP10124 158 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 GTF2H1P32780 548 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 RUNX1T1Q06455 604 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PDK3Q15120 406 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ZBTB39O15060 712 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 TBX3O15119 743 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 KLHL2O95198 593 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 HPCAP84074 193 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 DCAF6Q58WW2 860 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 ARMC4Q5T2S8 1044 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 GPRC5CQ9NQ84 441 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 TMCC3Q9ULS5 477 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 TFR2Q9UP52 801 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 PPRC1Q5VV67 1664 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 MROH7Q68CQ1 1323 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MAGEB2O15479 319 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PARNO95453 639 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 THPOP40225 353 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PERM1Q5SV97 790 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 GPAT2Q6NUI2 795 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 RCOR2Q8IZ40 523 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PTPRN2Q92932 1015 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 DCUN1D1Q96GG9 259 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MAGEB16A2A368 324 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 ITGB3P05106 788 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 ZFP69Q49AA0 526 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MAGED4Q96JG8 741 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 BTBD10Q9BSF8 475 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 WDR12Q9GZL7 423 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 GOLPH3Q9H4A6 298 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PCDHB7Q9Y5E2 793 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 A0A1B0GTH6 734 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 FAM47DPA6NHR8 397 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MSH4O15457 936 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PJA2O43164 708 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 TFRCP02786 760 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 ZNF806P0C7X5 589 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 GLB1LQ6UWU2 654 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PRPF39Q86UA1 669 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 CHST13Q8NET6 341 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 SCFD2Q8WU76 684 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 YIPF2Q9BWQ6 316 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 EHD4Q9H223 541 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 LSM7Q9UK45 103 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PTPRMP28827 1452 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 SKIV2L2P42285 1042 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 DHX34Q14147 1143 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 LACTB2Q53H82 288 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 WDR45BQ5MNZ6 344 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 TCHHL1Q5QJ38 904 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 NSMCE4AQ9NXX6 385 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MLXQ9UH92 298 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 XPO7Q9UIA9 1087 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 SETBP1Q9Y6X0 1596 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 TSPAN1O60635 241 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 AKT1P31749 480 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 UBASH3BQ8TF42 649 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 MED15Q96RN5 788 aa11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 EPS8L2Q9H6S3 715 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms