RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 EFCAB1Q9HAE3 211 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 NPTX2P47972 431 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SGCGQ13326 291 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 C16orf62Q7Z3J2 963 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SLC22A9Q8IVM8 553 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SKA1Q96BD8 255 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 MRPS26Q9BYN8 205 aaKnown RBP23.79■■□□□ 1.4
NPAS3-201ENST00000346562 ZDHHC9Q9Y397 364 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 WHRNQ9P202 907 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 HPS5Q9UPZ3 1129 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 TNNI3P19429 210 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 HIRAP54198 1017 aaPredicted RBP23.79■■□□□ 1.4
NPAS3-201ENST00000346562 GRB10Q13322 594 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 PPP1R10Q96QC0 940 aaKnown RBP23.79■■□□□ 1.4
NPAS3-201ENST00000346562 ELOVL6Q9H5J4 265 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 NT5MQ9NPB1 228 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 ENDOD1O94919 500 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 ZNF23P17027 643 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 NCF4Q15080 339 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 TMC7Q7Z402 723 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 MTG1Q9BT17 334 aaPredicted RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 MIEF1Q9NQG6 463 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 PCDHB5Q9Y5E4 795 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 A0A087WZ62 844 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CCT8L1PA6NM43 557 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 JAK1P23458 1154 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 SREBF1P36956 1147 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CCNG1P51959 295 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 C9orf131Q5VYM1 1079 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CHORDC1Q9UHD1 332 aaPredicted RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 KLHL20Q9Y2M5 609 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 TBKBP1A7MCY6 615 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 C4BPBP20851 252 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 LSP1P33241 339 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CCDC92Q53HC0 331 aaPredicted RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 USP18Q9UMW8 372 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 E9PBE3 544 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 STAU1O95793 577 aaKnown RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CYP11B1P15538 503 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 YWHAZP63104 245 aaKnown RBP23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CBWD2Q8IUF1 395 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 B3GALNT2Q8NCR0 500 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 HASPINQ8TF76 798 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 RGS18Q9NS28 235 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CNTNAP2Q9UHC6 1331 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 RANBP1P43487 201 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 SEL1L3Q68CR1 1132 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 CDK20Q8IZL9 346 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 MIER2Q8N344 545 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 DNERQ8NFT8 737 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 C19orf60Q96EN9 201 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 FBXO44Q9H4M3 255 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 KLHL28Q9NXS3 571 aa23.78■■□□□ 1.4
NPAS3-201ENST00000346562 MAPK7Q13164 816 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 STRA8Q7Z7C7 330 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 ZCCHC2Q9C0B9 1178 aaKnown RBP23.77■■□□□ 1.4
NPAS3-201ENST00000346562 BATF3Q9NR55 127 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 AMHP03971 560 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 TFE3P19532 575 aaPredicted RBP23.77■■□□□ 1.4
NPAS3-201ENST00000346562 PPP2R1BP30154 601 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 CPA2P48052 419 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 DSG1Q02413 1049 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 DPP10Q8N608 796 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 KCNB2Q92953 911 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 GPRC5CQ9NQ84 441 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 SATB2Q9UPW6 733 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 TKTL1P51854 596 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 MMRN1Q13201 1228 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 CAAP1Q9H8G2 361 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 GEMIN8Q9NWZ8 242 aaKnown RBP23.77■■□□□ 1.4
NPAS3-201ENST00000346562 ADAM30Q9UKF2 790 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 PHTF1Q9UMS5 762 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 ITPK1Q13572 414 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 GPAMQ9HCL2 828 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 GPATCH2LQ9NWQ4 482 aa23.77■■□□□ 1.4
NPAS3-201ENST00000346562 MED24O75448 989 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 HOXC6P09630 235 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 VHLP40337 213 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 ATN1P54259 1190 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 OTUD4Q01804 1114 aaKnown RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 KAT2BQ92831 832 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 VPS51Q9UID3 782 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 PLIN5Q00G26 463 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MCL1Q07820 350 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 SPOCD1Q6ZMY3 1216 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 DEFB128Q7Z7B8 93 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 APBB2Q92870 758 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 SERAC1Q96JX3 654 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MAGEB18Q96M61 343 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 PEX5P50542 639 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 CYP24A1Q07973 514 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 PPIL2Q13356 520 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 ZDHHC15Q96MV8 337 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 RPRD1BQ9NQG5 326 aaKnown RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MPOP05164 745 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms