RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 LILRB3O75022 631 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ABLIM3O94929 683 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ZRANB2O95218 330 aaKnown RBP eCLIP13.25□□□□□ -0.29
CT55-202ENST00000344129 CXCL14O95715 111 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CA3P07451 260 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 KRT7P08729 469 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SPATA31D3P0C874 917 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 RARAP10276 462 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CTSAP10619 480 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 DESP17661 470 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ATF6P18850 670 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 DNAJB1P25685 340 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ERVFC1P60507 584 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 YWHAGP61981 247 aaKnown RBP eCLIP13.25□□□□□ -0.29
CT55-202ENST00000344129 MRPS25P82663 173 aaKnown RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 NME3Q13232 169 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ODF2Q5BJF6 829 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 MFSD7Q6UXD7 560 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SPATA31D4Q6ZUB0 917 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 DENND5BQ6ZUT9 1274 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CYP4V2Q6ZWL3 525 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 RSRC2Q7L4I2 434 aaKnown RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 ZNF572Q7Z3I7 529 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 EXD1Q8NHP7 514 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ZNF461Q8TAF7 563 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SLC7A14Q8TBB6 771 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CENPIQ92674 756 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 NPY6RQ99463 290 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 HEMGNQ9BXL5 484 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 GMIPQ9P107 970 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SLC38A8A6NNN8 435 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CTIFO43310 598 aaKnown RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 CD48P09326 243 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 RAB33AQ14088 237 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 PLPP4Q5VZY2 271 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SLC13A5Q86YT5 568 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 RCOR2Q8IZ40 523 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SCML4Q8N228 414 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 SPATA17Q96L03 361 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ENTPD7Q9NQZ7 604 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.25□□□□□ -0.29
CT55-202ENST00000344129 NUDT5Q9UKK9 219 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 TTC7AQ9ULT0 858 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 STAP1Q9ULZ2 295 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 CNPP09543 421 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 RALAP11233 206 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 KRT10P13645 584 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 ATF2P15336 505 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 YWHAQP27348 245 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.29
CT55-202ENST00000344129 PBX2P40425 430 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 DEUP1Q05D60 604 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 ELF2Q15723 593 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 KCTD19Q17RG1 926 aaPredicted RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 ZC3H12AQ5D1E8 599 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 KAZNQ674X7 775 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 KLHL7Q8IXQ5 586 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 CCDC185Q8N715 623 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 SPPL3Q8TCT6 385 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 UBXN4Q92575 508 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 FBXO32Q969P5 355 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 RBM41Q96IZ5 413 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 PLVAPQ9BX97 442 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 UBE2OQ9C0C9 1292 aaKnown RBP13.24□□□□□ -0.29
CT55-202ENST00000344129 FBXO44Q9H4M3 255 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 FAM204AQ9H8W3 233 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 RXFP1Q9HBX9 757 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
CT55-202ENST00000344129 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
CT55-202ENST00000344129 GBF1Q92538 1859 aa13.23□□□□□ -0.29
CT55-202ENST00000344129 C3orf70A6NLC5 250 aaPredicted RBP13.23□□□□□ -0.29
CT55-202ENST00000344129 HIDE1A8MVS5 230 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms