RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 GPR174Q9BXC1 333 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 B3GNT5Q9BYG0 378 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 INTS13Q9NVM9 706 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 WSB2Q9NYS7 404 aaPredicted RBP17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 EHD2Q9NZN4 543 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 SH3BP1Q9Y3L3 701 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 PTPRQQ9UMZ3 2332 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 ZNF462Q96JM2 2506 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 MEI4A8MW99 385 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 SLC26A4O43511 780 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 ZNF883P0CG24 379 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 NCAM1P13591 858 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 YWHAQP27348 245 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 RHBDD1Q8TEB9 315 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 FBXO32Q969P5 355 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 KCNK16Q96T55 309 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 MMS19Q96T76 1030 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 MRPL44Q9H9J2 332 aaKnown RBP17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 MYLKQ15746 1914 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
NECTIN1-202ENST00000340882 NEDD8-MDP1E9PL57 170 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 ZBTB24O43167 697 aaPredicted RBP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 CISD3P0C7P0 127 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 PLA2G2AP14555 144 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 PTPN1P18031 435 aaKnown RBP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 GARTP22102 1010 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 MATKP42679 507 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 FUT11Q495W5 492 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 HECTD3Q5T447 861 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 DCAF12L1Q5VU92 463 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 SDE2Q6IQ49 451 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 USP49Q70CQ1 688 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 NUP93Q8N1F7 819 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 C1orf216Q8TAB5 229 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 MKRN2Q9H000 416 aaKnown RBP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 USP36Q9P275 1121 aaKnown RBP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.37■□□□□ 0.37
NECTIN1-202ENST00000340882 MGAQ8IWI9 3026 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 NAV2Q8IVL1 2488 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 A0A1B0GVT2 93 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 CACNG3O60359 315 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 LDHAP00338 332 aaKnown RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 CST3P01034 146 aaPredicted RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 TYRP14679 529 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 ABCG1P45844 678 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 PREPLQ4J6C6 727 aaPredicted RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 TPGS1Q6ZTW0 290 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 NUDT18Q6ZVK8 323 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 DNAJC19Q96DA6 116 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 DUSP9Q99956 384 aaKnown RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 BBS2Q9BXC9 721 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 ITM2CQ9NQX7 267 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 GMIPQ9P107 970 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 EIF2B4Q9UI10 523 aaKnown RBP17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 RAI2Q9Y5P3 530 aa17.36■□□□□ 0.37
NECTIN1-202ENST00000340882 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 BCAT2O15382 392 aaPredicted RBP17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 GCNT3O95395 438 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 CER1O95813 267 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 CLDN6P56747 220 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 SMAD1Q15797 465 aaKnown RBP17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 PTPRNQ16849 979 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 CCDC157Q569K6 752 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 SNX30Q5VWJ9 437 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 GALNT15Q8N3T1 639 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 OR6B3Q8NGW1 331 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 RASSF8Q8NHQ8 419 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 CDC6Q99741 560 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 ELOVL4Q9GZR5 314 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 PRORYQ9H606 182 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 NFE2L3Q9Y4A8 694 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 STON1Q9Y6Q2 735 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 ATMQ13315 3056 aa17.35■□□□□ 0.37
NECTIN1-202ENST00000340882 METTL12A8MUP2 240 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 KCNK3O14649 394 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 FLRT2O43155 660 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 TBX18O95935 607 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 ZDHHC11BP0C7U3 371 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 CSNK1EP49674 416 aaKnown RBP17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 TPMTP51580 245 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 DHRS13Q6UX07 377 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 PAQR9Q6ZVX9 377 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 HTR3DQ70Z44 454 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 METTL3Q86U44 580 aaKnown RBP17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 CBWD2Q8IUF1 395 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 GPD1LQ8N335 351 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 PDZD8Q8NEN9 1154 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 CADM4Q8NFZ8 388 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 OVCA2Q8WZ82 227 aa17.34■□□□□ 0.37
NECTIN1-202ENST00000340882 BHMTQ93088 406 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms