RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 I3L4J1 428 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 PIK3R2O00459 728 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 TMED1Q13445 227 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 CCDC6Q16204 474 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 TCTN1Q2MV58 587 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 C9orf57Q5W0N0 161 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 ENOSF1Q7L5Y1 443 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 ZDHHC14Q8IZN3 488 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 GDAP1Q8TB36 358 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 SPATA7Q9P0W8 599 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 TJP2Q9UDY2 1190 aa15.73■□□□□ 0.11
BRAT1-201ENST00000340611 TTC7AQ9ULT0 858 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-201ENST00000340611 ARL5CA6NH57 179 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 MNX1P50219 401 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-201ENST00000340611 ADCY1Q08828 1119 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 DAB2IPQ5VWQ8 1189 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 EXOC3L1Q86VI1 746 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 FAM126BQ8IXS8 530 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 SLC43A3Q8NBI5 491 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 IFT43Q96FT9 208 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 HIC2Q96JB3 615 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 NMRK1Q9NWW6 199 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 RALGAPA2Q2PPJ7 1873 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 FAM187AA6NFU0 413 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 PDGFRBP09619 1106 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 PTGIRP43119 386 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 KCNJ1P48048 391 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 GPNMBQ14956 572 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 PRELID2Q8N945 189 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 BEST2Q8NFU1 509 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 LINC01599Q8WXQ3 324 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 RMDN2Q96LZ7 410 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 RASAL2Q9UJF2 1139 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 ITGA11Q9UKX5 1188 aa15.72■□□□□ 0.11
BRAT1-201ENST00000340611 TIMM13Q9Y5L4 95 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-201ENST00000340611 TCRBV7S2A1N4TA0A589 114 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 NVLO15381 856 aaKnown RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 RIPK2O43353 540 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 NBNO60934 754 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 ACSL3O95573 720 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 NDST1P52848 882 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 PCBP1Q15365 356 aaKnown RBP eCLIP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 KYAT1Q16773 422 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 SPDYCQ5MJ68 293 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 C11orf70Q9BRQ4 267 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 PLEKHA5Q9HAU0 1116 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 KCNK9Q9NPC2 374 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 DNAJC17Q9NVM6 304 aaKnown RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 CYP1A1P04798 512 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 TMEM253P0C7T8 217 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 FGFR1P11362 822 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 ACADSP16219 412 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 CDK7P50613 346 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 DHX34Q14147 1143 aaKnown RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 GALNTL6Q49A17 601 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 OLFML1Q6UWY5 402 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 C3orf58Q8NDZ4 430 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 NAP1L3Q99457 506 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 BCO2Q9BYV7 579 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 DPEP3Q9H4B8 488 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 CTNNAL1Q9UBT7 734 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 MTRF1LQ9UGC7 380 aaKnown RBP15.71■□□□□ 0.11
BRAT1-201ENST00000340611 ALG6Q9Y672 507 aa15.71■□□□□ 0.11
BRAT1-201ENST00000340611 TMEM120BA0PK00 339 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.1
BRAT1-201ENST00000340611 SUN1O94901 812 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 CLCNKBP51801 687 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 ZNF132P52740 706 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 TRIM60Q495X7 471 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 IRGCQ6NXR0 463 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 SLC4A11Q8NBS3 891 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 ZNF653Q96CK0 615 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 DNAJC1Q96KC8 554 aaKnown RBP15.71■□□□□ 0.1
BRAT1-201ENST00000340611 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 OGDHLQ9ULD0 1010 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 UBQLN1Q9UMX0 589 aaKnown RBP15.71■□□□□ 0.1
BRAT1-201ENST00000340611 ZNF711Q9Y462 761 aa15.71■□□□□ 0.1
BRAT1-201ENST00000340611 PDLIM1O00151 329 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 TMCC1O94876 653 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 HSPA8P11142 646 aaKnown RBP15.7■□□□□ 0.1
BRAT1-201ENST00000340611 LMO2P25791 158 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 CLEC16AQ2KHT3 1053 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 LRRC8DQ7L1W4 858 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 DEFB128Q7Z7B8 93 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 ACOT1Q86TX2 421 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 APLFQ8IW19 511 aaPredicted RBP15.7■□□□□ 0.1
BRAT1-201ENST00000340611 DBF4BQ8NFT6 615 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 C17orf50Q8WW18 174 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.7■□□□□ 0.1
BRAT1-201ENST00000340611 CTTNBP2NLQ9P2B4 639 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 TMCO1Q9UM00 188 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 NCANO14594 1321 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 B4GALT3O60512 393 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 PHF2O75151 1096 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 TARSP26639 723 aaKnown RBP15.7■□□□□ 0.1
BRAT1-201ENST00000340611 CYP2C18P33260 490 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 GATMP50440 423 aa15.7■□□□□ 0.1
BRAT1-201ENST00000340611 ERFP50548 548 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms