RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FHOD1Q9Y613 1164 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 SART1O43290 800 aaKnown RBP20.14■□□□□ 0.81
SYNE4-202ENST00000340477 ARSAP15289 507 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 KRT9P35527 623 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 SOX9P48436 509 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 LRRC32Q14392 662 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 DRAP1Q14919 205 aaPredicted RBP20.14■□□□□ 0.81
SYNE4-202ENST00000340477 EML3Q32P44 896 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 PM20D1Q6GTS8 502 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 DHX40Q8IX18 779 aaKnown RBP20.14■□□□□ 0.81
SYNE4-202ENST00000340477 CCDC105Q8IYK2 499 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 SCML4Q8N228 414 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 ZNF276Q8N554 614 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 NEK11Q8NG66 645 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 RNF139Q8WU17 664 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 OTUB2Q96DC9 234 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 HPS4Q9NQG7 708 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 FAM207AQ9NSI2 230 aaPredicted RBP20.14■□□□□ 0.81
SYNE4-202ENST00000340477 OSER1Q9NX31 292 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 RASAL2Q9UJF2 1139 aa20.14■□□□□ 0.81
SYNE4-202ENST00000340477 COL4A3Q01955 1670 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 FOXN3O00409 490 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-202ENST00000340477 PI15O43692 258 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 DCNP07585 359 aaKnown RBP20.13■□□□□ 0.81
SYNE4-202ENST00000340477 TARSP26639 723 aaKnown RBP20.13■□□□□ 0.81
SYNE4-202ENST00000340477 PGFP49763 221 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 SNX16P57768 344 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 SYCP1Q15431 976 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 ZSCAN23Q3MJ62 389 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 PMF1Q6P1K2 205 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 SCD5Q86SK9 330 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 FAM71AQ8IYT1 594 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 DTWD2Q8NBA8 298 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 IRGQQ8WZA9 623 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 SPAG5Q96R06 1193 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 TRIM62Q9BVG3 475 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 STK33Q9BYT3 514 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 IRF2BPLQ9H1B7 796 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 ECT2Q9H8V3 914 aa20.13■□□□□ 0.81
SYNE4-202ENST00000340477 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-202ENST00000340477 ARIH1Q9Y4X5 557 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-202ENST00000340477 GOLGA6L19H0YKK7 550 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 GALR2O43603 387 aaPredicted RBP20.12■□□□□ 0.81
SYNE4-202ENST00000340477 TBX18O95935 607 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 ADH1CP00326 375 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 PTPN5P54829 565 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 DAOAP59103 153 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 COG7P83436 770 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 ZXDBP98169 803 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 EFEMP1Q12805 493 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 DENND1BQ6P3S1 775 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 MIB1Q86YT6 1006 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 STK32AQ8WU08 396 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 ZFRQ96KR1 1074 aaKnown RBP20.12■□□□□ 0.81
SYNE4-202ENST00000340477 ABCC13Q9NSE7 274 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 PCDHGC3Q9UN70 934 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 F5P12259 2224 aa20.12■□□□□ 0.81
SYNE4-202ENST00000340477 LRRC10BA6NIK2 292 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 F8VZ95 297 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 PIK3R2O00459 728 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 ATP1A3P13637 1013 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 GPD2P43304 727 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 RPS9P46781 194 aaKnown RBP20.11■□□□□ 0.81
SYNE4-202ENST00000340477 POLR2FP61218 127 aaKnown RBP20.11■□□□□ 0.81
SYNE4-202ENST00000340477 SLC47A2Q86VL8 602 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 IER2Q9BTL4 223 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 NAA15Q9BXJ9 866 aaKnown RBP20.11■□□□□ 0.81
SYNE4-202ENST00000340477 KLF16Q9BXK1 252 aaPredicted RBP20.11■□□□□ 0.81
SYNE4-202ENST00000340477 MIS12Q9H081 205 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 GANQ9H2C0 597 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 HSD3B7Q9H2F3 369 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 MARCH2Q9P0N8 246 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 NUDT5Q9UKK9 219 aa20.11■□□□□ 0.81
SYNE4-202ENST00000340477 SCAMP3O14828 347 aaKnown RBP20.1■□□□□ 0.81
SYNE4-202ENST00000340477 MDM4O15151 490 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 SERPINC1P01008 464 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 PNMA6AP0CW24 399 aaPredicted RBP20.1■□□□□ 0.81
SYNE4-202ENST00000340477 KLK7P49862 253 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 GRSF1Q12849 480 aaKnown RBP eCLIP20.1■□□□□ 0.81
SYNE4-202ENST00000340477 PDCLQ13371 301 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 PON2Q15165 354 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 DGKKQ5KSL6 1271 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 BSPRYQ5W0U4 402 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 DPY19L2P1Q6NXN4 242 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 PASD1Q8IV76 773 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 IPO4Q8TEX9 1081 aaKnown RBP20.1■□□□□ 0.81
SYNE4-202ENST00000340477 ERGIC2Q96RQ1 377 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 DCLK3Q9C098 648 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 LINC00597Q9H2U6 94 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 SYNCQ9H7C4 482 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 ZNF510Q9Y2H8 683 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 SIK3Q9Y2K2 1263 aa20.1■□□□□ 0.81
SYNE4-202ENST00000340477 MTF2Q9Y483 593 aaPredicted RBP20.1■□□□□ 0.81
SYNE4-202ENST00000340477 YJEFN3A6XGL0 299 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 E7ENQ6 273 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 LTFP02788 710 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 GJA4P35212 333 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 CLCN1P35523 988 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms